RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 COMMD9Q9P000 198 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 WASHC3Q9Y3C0 194 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 HILPDAQ9Y5L2 63 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 DOCK11Q5JSL3 2073 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 MED13LQ71F56 2210 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1W2PPI3 338 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 RAMP3O60896 148 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 IFNA21P01568 189 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 SULT1A3P0DMM9 295 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 SULT1A4P0DMN0 295 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 BRS3P32247 399 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 LGALS7P47929 136 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 SSX2Q16385 188 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TMEM177Q53S58 311 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 LIN54Q6MZP7 749 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 C9orf139Q6ZV77 190 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 OSR1Q8TAX0 266 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-207ENST00000637212 LSM10Q969L4 123 aaKnown RBP10.8□□□□□ -0.68
LINC00643-207ENST00000637212 FLYWCH2Q96CP2 140 aaKnown RBP10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TMUB1Q9BVT8 246 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TMEM160Q9NX00 188 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 FAM96BQ9Y3D0 163 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 TMED3Q9Y3Q3 217 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 AKAP9Q99996 3911 aa10.8□□□□□ -0.68
LINC00643-207ENST00000637212 hCG_2014768A0A024R1R8 64 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 FAM90A9PA6NNJ1 464 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 H7C2Y5 167 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 TIMM23O14925 209 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 HRASP01112 189 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 NQO2P16083 231 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 VDAC1P21796 283 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 DYNLT3P51808 116 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 AANATQ16613 207 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 FAM219AQ8IW50 185 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 OR4C13Q8NGP0 309 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 LHFPL5Q8TAF8 219 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 ASB13Q8WXK3 278 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 PRR13Q9NZ81 148 aa10.79□□□□□ -0.68
LINC00643-207ENST00000637212 HIVEP1P15822 2718 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 IGHV3OR16-10A0A075B7F0 116 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 VGLL3A8MV65 326 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 A8MV72 311 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-207ENST00000637212 CRYZL1O95825 349 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 FAM106CPP0CH98 169 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 SLC25A6P12236 298 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 CD99P14209 185 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 EBI3Q14213 229 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 FCN2Q15485 313 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 POU2AF1Q16633 256 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 OR2B11Q5JQS5 317 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 RUSC1-AS1Q66K80 236 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 LYZL2Q7Z4W2 148 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 DYNAPQ8N1N2 210 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 CFHR4Q92496 578 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 RRNAD1Q96FB5 475 aaKnown RBP10.78□□□□□ -0.68
LINC00643-207ENST00000637212 SEC22AQ96IW7 307 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 MS4A7Q9GZW8 240 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-207ENST00000637212 YAE1D1Q9NRH1 226 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 ARHGAP32A7KAX9 2087 aa10.78□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1B0GU03 582 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 OR2A4O95047 310 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 S1PR2O95136 353 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 MOSP00540 346 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 IGKV1-16P04430 117 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 HOXB5P09067 269 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 FBP1P09467 338 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 RIPPLY3P57055 190 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 ERVK-16P61578 105 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
LINC00643-207ENST00000637212 CYCSP99999 105 aaKnown RBP10.77□□□□□ -0.69
LINC00643-207ENST00000637212 SRSF4Q08170 494 aaKnown RBP10.77□□□□□ -0.69
LINC00643-207ENST00000637212 C2orf68Q2NKX9 166 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 GGNBP1Q5YKI7 109 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 GSG1LQ6UXU4 331 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 OR11H7Q8NGC8 314 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 OR2A7Q96R45 310 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 MGAT4CQ9UBM8 478 aa10.77□□□□□ -0.69
LINC00643-207ENST00000637212 YLPM1P49750 1951 aaKnown RBP10.77□□□□□ -0.69
LINC00643-207ENST00000637212 A0A0U1RQK1 487 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 GOSR2O14653 212 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 SHOXO15266 292 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 ADAP1O75689 374 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 VENTXO95231 258 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 KRASP01116 189 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 IGKV1-5P01602 117 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 P0C879 139 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 HNF1AP20823 631 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 NMSQ5H8A3 153 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 FAM120AOSQ5T036 256 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 H2BFWTQ7Z2G1 175 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms