RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PLSCR3Q9NRY6 295 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 M0QZK8 103 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 FGF16O43320 207 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 FCGR3BO75015 233 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 CRYZL1O95825 349 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 CRYBA1P05813 215 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 ABCA11PQ4W5N1 156 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 OR4C13Q8NGP0 309 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 OR4S2Q8NH73 311 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 FLYWCH2Q96CP2 140 aaKnown RBP12.75□□□□□ -0.37
CLN6-216ENST00000636876 SCGB3A2Q96PL1 93 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
CLN6-216ENST00000636876 C14orf166Q9Y224 244 aaKnown RBP12.75□□□□□ -0.37
CLN6-216ENST00000636876 NCBP2LA6PVI3 153 aaKnown RBP12.74□□□□□ -0.37
CLN6-216ENST00000636876 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLN6-216ENST00000636876 LYRM1O43325 122 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 CNTFRP26992 372 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 BTCP35070 178 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 CCR6P51684 374 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 F2RL1P55085 397 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 PIGPP57054 158 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 RPS16P62249 146 aaKnown RBP12.74□□□□□ -0.37
CLN6-216ENST00000636876 MMDQ15546 238 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 Q8N9W7 124 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 TSC22D3Q99576 134 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
CLN6-216ENST00000636876 SLC25A21Q9BQT8 299 aaPredicted RBP12.74□□□□□ -0.37
CLN6-216ENST00000636876 RTBDNQ9BSG5 229 aaPredicted RBP12.74□□□□□ -0.37
CLN6-216ENST00000636876 NPFFR1Q9GZQ6 430 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 C1RLQ9NZP8 487 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
CLN6-216ENST00000636876 MPPED1O15442 326 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 NBR2O15453 112 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 PEX14O75381 377 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 NDUFA3O95167 84 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 AMY1AP04745 511 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 F2RP25116 425 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 LGALS7P47929 136 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 RELBQ01201 579 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 IFITM3Q01628 133 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 KRTAP24-1Q3LI83 254 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 C11orf88Q6PI97 169 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 TCTEX1D1Q8N7M0 179 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.73□□□□□ -0.37
CLN6-216ENST00000636876 POC5Q8NA72 575 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 NPBQ8NG41 125 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
CLN6-216ENST00000636876 CD300LFQ8TDQ1 290 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 C5orf66Q9H5L9 145 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 RANBP3Q9H6Z4 567 aaPredicted RBP12.73□□□□□ -0.37
CLN6-216ENST00000636876 LIN7CQ9NUP9 197 aaKnown RBP12.73□□□□□ -0.37
CLN6-216ENST00000636876 COPZ2Q9P299 210 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 TBC1D24Q9ULP9 559 aa12.73□□□□□ -0.37
CLN6-216ENST00000636876 RRHO14718 337 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 SHOXO15266 292 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 RAMP3O60896 148 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 NDUFA7O95182 113 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 SPDEFO95238 335 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 ASAH1Q13510 395 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 PSG5Q15238 335 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 RBMS2Q15434 407 aaKnown RBP12.72□□□□□ -0.37
CLN6-216ENST00000636876 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 Q6ZSV7 163 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLN6-216ENST00000636876 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
CLN6-216ENST00000636876 KIAA1456Q9P272 454 aa12.72□□□□□ -0.37
CLN6-216ENST00000636876 SRRM4A7MD48 611 aaKnown RBP12.71□□□□□ -0.37
CLN6-216ENST00000636876 TSPAN9O75954 239 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 NDUFB6O95139 128 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 VSIG10L2P0DP72 767 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 HKR1P10072 659 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 RAG2P55895 527 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 BLCAPP62952 87 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 ZNF702PQ9H963 129 aa12.71□□□□□ -0.37
CLN6-216ENST00000636876 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
CLN6-216ENST00000636876 H0Y980 276 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 SLC25A17O43808 307 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 S1PR2O95136 353 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 MZT2BQ6NZ67 158 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 Q8N2B8 174 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
CLN6-216ENST00000636876 TMEM158Q8WZ71 300 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 TMEM230Q96A57 120 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 FBXL15Q9H469 300 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 PLEKHA2Q9HB19 425 aa12.7□□□□□ -0.38
CLN6-216ENST00000636876 METTL1Q9UBP6 276 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms