RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 ATP5G3P48201 142 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 SERF2P84101 59 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 OR10A7Q8NGE5 316 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 HCFC1P51610 2035 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 SELLP14151 372 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 GFOD1Q9NXC2 390 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 DMRT1Q9Y5R6 373 aa11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 TNRC6BQ9UPQ9 1833 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-228ENST00000636610 YLPM1P49750 1951 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 TRAV3A0A0B4J244 114 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 MSMO1Q15800 293 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 SPRNQ5BIV9 151 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 LINC00469Q8N7U9 141 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 SSMEM1Q8WWF3 244 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 NPCDR1Q9BY65 106 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 PRO3102Q9H379 93 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 MBNL3Q9NUK0 354 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 NAT8Q9UHE5 227 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 HOXC12P31275 282 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 ZNF146Q15072 292 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 ABHD12Q8N2K0 398 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 MDS2Q8NDY4 140 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 OR2Z1Q8NG97 314 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 GPR87Q9BY21 358 aa11.72□□□□□ -0.53
CACNA1A-228ENST00000636610 C11orf94C9JXX5 98 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 PPP5D1E7EU14 171 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 SLC25A6P12236 298 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 CD59P13987 128 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 MYOD1P15172 320 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 NPPCP23582 126 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 PINX1Q96BK5 328 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 OR5B12Q96R08 314 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 ZPBPQ9BS86 351 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 DDA1Q9BW61 102 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 HSPB7Q9UBY9 170 aa11.71□□□□□ -0.53
CACNA1A-228ENST00000636610 NDUFB4O95168 129 aa11.71□□□□□ -0.54
CACNA1A-228ENST00000636610 CD33P20138 364 aa11.71□□□□□ -0.54
CACNA1A-228ENST00000636610 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.54
CACNA1A-228ENST00000636610 LRRC29Q8WV35 223 aa11.71□□□□□ -0.54
CACNA1A-228ENST00000636610 GYPAP02724 150 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 CATR1Q13166 79 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 FAM78BQ5VT40 261 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 WDR82Q6UXN9 313 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 DEFB108BQ8NET1 73 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 A0A1B0GV90 55 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 B4DEV8 164 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 CDX4O14627 284 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 C1QTNF9P0C862 333 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 RNF224P0DH78 156 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 GNB2P62879 340 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 FAM122AQ96E09 287 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 HEYLQ9NQ87 328 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 RELNP78509 3460 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 SPTA1P02549 2419 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNF729A6NN14 1252 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 RNF212BA8MTL3 300 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 M0R1X1 148 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 KBTBD11O94819 623 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 COX5AP20674 150 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 THBS3P49746 956 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 PRAMEF5Q5TYX0 476 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 Q8IYB0 196 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 OPN3Q9H1Y3 402 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 WIPI2Q9Y4P8 454 aa11.7□□□□□ -0.54
CACNA1A-228ENST00000636610 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 C21orf140B9A014 251 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 RRHO14718 337 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 HIST1H1BP16401 226 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 GABRA6Q16445 453 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 MIC13Q5XKP0 118 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 ACP7Q6ZNF0 438 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 CD177Q8N6Q3 437 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 FER1L6-AS2Q96M78 137 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 OOEPA6NGQ2 149 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 PROP1O75360 226 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 CECR9P0C854 216 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 GPR12P47775 334 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms