RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 MTFP1Q9UDX5 166 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 NAT8Q9UHE5 227 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SHPKQ9UHJ6 478 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 BOKQ9UMX3 212 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 VSIG4Q9Y279 399 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 UGT2A1Q9Y4X1 527 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 INSIG2Q9Y5U4 225 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM131LA2VDJ0 1609 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SYNJ1O43426 1573 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 MIA3Q5JRA6 1907 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 FER1L6Q2WGJ9 1857 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 NUP210LQ5VU65 1888 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 NAIPQ13075 1403 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 UACAQ9BZF9 1416 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 QRICH2Q9H0J4 1663 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 THSD7AQ9UPZ6 1657 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 BAZ1AQ9NRL2 1556 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TRBV19A0A075B6N1 114 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TRAV4A0A0B4J268 109 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 A0A0G2JRQ6 117 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM269A0A1B0GVZ9 245 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PGPA6NDG6 321 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 RIIAD1A6NNX1 92 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 KNCNA6PVL3 124 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 KLLNB2CW77 178 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C12orf77C9JDV5 145 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 UPK2O00526 184 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 UBFD1O14562 309 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 XKRYO14609 159 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 OVOL1O14753 267 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 FFAR1O14842 300 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TBL1XO60907 577 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 DUS4LO95620 317 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 UCHL1P09936 223 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 OR4Q2P0C623 313 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 ATP6V0CP27449 155 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 CASP1P29466 404 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PPP1CCP36873 323 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 LPAR6P43657 344 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 RPL29P47914 159 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 ATP5G3P48201 142 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 NDUFA8P51970 172 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 NDUFA6P56556 154 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PAX8Q06710 450 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 SLC38A11Q08AI6 406 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 MMDQ15546 238 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 MLF2Q15773 248 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM241Q24JQ0 296 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 Q499Y3 187 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PYY3Q5JQD4 70 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C6orf52Q5T4I8 152 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 Q5XG85 94 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 KDM4DQ6B0I6 523 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 WDR59Q6PJI9 974 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 RASL11AQ6T310 242 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 HRCT1Q6UXD1 115 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 CLEC19AQ6UXS0 136 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 VN1R4Q7Z5H5 301 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C6orf223Q8N319 242 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PACRGLQ8N7B6 248 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 DCAF4L2Q8NA75 395 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 LY6G5BQ8NDX9 201 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 CHCHD10Q8WYQ3 142 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PP6455Q8WZ26 134 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 FRZBQ92765 325 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 RBPMSQ93062 196 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C11orf52Q96A22 123 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 SLC25A44Q96H78 314 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 SLC35E1Q96K37 410 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 SIGLEC12Q96PQ1 595 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 ZNF300Q96RE9 604 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 MRPL57Q9BQC6 102 aaKnown RBP2.25□□□□□ -2.05
PSPC1-208ENST00000635562 C19orf24Q9BVV8 132 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 SELENOIQ9C0D9 397 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 JPT2Q9H910 190 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 PARP11Q9NR21 331 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 HEBP1Q9NRV9 189 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 OR5AC2Q9NZP5 309 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM216Q9P0N5 145 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 RBM12B-AS1Q9P1G2 102 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 LAMTOR3Q9UHA4 124 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 NEUROG3Q9Y4Z2 214 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 V9GY05 133 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 TEX14Q8IWB6 1497 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 NSD3Q9BZ95 1437 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 MYH7BA7E2Y1 1941 aa2.25□□□□□ -2.05
PSPC1-208ENST00000635562 KTN1Q86UP2 1357 aaKnown RBP2.24□□□□□ -2.05
PSPC1-208ENST00000635562 PARP14Q460N5 1801 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 FRMPD1Q5SYB0 1578 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 LRRK1Q38SD2 2015 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 hCG_1818297A0A087WSY0 165 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 SPAARA0A1B0GVQ0 90 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM212A6NML5 194 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 A8MT66 165 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 C1orf196B1AJZ1 125 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 H0YJW9 148 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 LY6LH3BQJ8 138 aa2.24□□□□□ -2.05
PSPC1-208ENST00000635562 H7BYZ3 331 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms