RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MFSD4AQ8N468 514 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 OSR1Q8TAX0 266 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-208ENST00000626828 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 HARBI1Q96MB7 349 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 SRRM4A7MD48 611 aaKnown RBP13.11□□□□□ -0.31
UBE3D-208ENST00000626828 NUDT19A8MXV4 375 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 PF4P02776 101 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
UBE3D-208ENST00000626828 CRYGBP07316 175 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 RFX2P48378 723 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 TAS2R46P59540 309 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 SPCS2Q15005 226 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 AKIRIN2Q53H80 203 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 ZNF66Q6ZN08 573 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 SNX29P2Q8IUI4 249 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 LYSMD2Q8IV50 215 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 TCTEX1D1Q8N7M0 179 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 TEX45Q8NA69 505 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 MINDY2Q8NBR6 621 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 ABHD5Q8WTS1 349 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 C15orf40Q8WUR7 153 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 SECTM1Q8WVN6 248 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 SLC5A7Q9GZV3 580 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 CCL28Q9NRJ3 127 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
UBE3D-208ENST00000626828 FCGR3BO75015 233 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 CNIH1O95406 144 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 CRYZL1O95825 349 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 CA2P00918 260 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-208ENST00000626828 PSMB8P28062 276 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 MYCNOSP40205 109 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 FXYD3Q14802 87 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 VMA21Q3ZAQ7 101 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 OR5H2Q8NGV7 314 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 BORCS5Q969J3 196 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 EHFQ9NZC4 300 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
UBE3D-208ENST00000626828 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
UBE3D-208ENST00000626828 PMP2P02689 132 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 CD33P20138 364 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 UBE2KP61086 200 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 HERV-K104P61576 105 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
UBE3D-208ENST00000626828 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-208ENST00000626828 KLHL30-AS1Q8NEE0 82 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 OR6F1Q8NGZ6 308 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 EXTL2Q9UBQ6 330 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 FBXO7Q9Y3I1 522 aa13.09□□□□□ -0.31
UBE3D-208ENST00000626828 RGS5O15539 181 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 HLA-DMAP28067 261 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 CD40LGP29965 261 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 RAB9AP51151 201 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 FXYD4P59646 89 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 NDPQ00604 133 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 DEFA6Q01524 100 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 PJVKQ0ZLH3 352 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 LCNL1Q6ZST4 164 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 LFNGQ8NES3 379 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 ARPC1AQ92747 370 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 UBE2E2Q96LR5 201 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 TMEM68Q96MH6 324 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
UBE3D-208ENST00000626828 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 FOXA2Q9Y261 457 aaPredicted RBP13.08□□□□□ -0.32
UBE3D-208ENST00000626828 A3GALT2U3KPV4 340 aa13.08□□□□□ -0.32
UBE3D-208ENST00000626828 A0A1W2PN81 502 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 CTDSP2O14595 271 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 RCVRNP35243 200 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 CHRNA7P36544 502 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 ACTBL2Q562R1 376 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 OR5M8Q8NGP6 311 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 OR4S2Q8NH73 311 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 AIFM2Q9BRQ8 373 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
UBE3D-208ENST00000626828 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
UBE3D-208ENST00000626828 G3V4G9 280 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 CCL24O00175 119 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 ARPC1BO15143 372 aaKnown RBP13.06□□□□□ -0.32
UBE3D-208ENST00000626828 GNRHRP30968 328 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 HRH1P35367 487 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 TSPAN5P62079 268 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 GNB1P62873 340 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 CATR1Q13166 79 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 KIAA0141Q14154 515 aaPredicted RBP13.06□□□□□ -0.32
UBE3D-208ENST00000626828 PRSS8Q16651 343 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms