RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 FAM27BQ5VT28 67 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 ATRAIDQ6UW56 229 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 OR1K1Q8NGR3 316 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 VPS25Q9BRG1 176 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 CYTL1Q9NRR1 136 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 POLDIP2Q9Y2S7 368 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 KCNIP3Q9Y2W7 256 aa9.73□□□□□ -0.85
LINC00538-201ENST00000626109 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PSMB11A5LHX3 300 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 NKX2-6A6NCS4 301 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF705EA8MWA4 302 aaPredicted RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 CTSDP07339 412 aaPredicted RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 HOXB5P09067 269 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 RSU1Q15404 277 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 OR8G2PQ6IF36 304 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 NPRL2Q8WTW4 380 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 NABP1Q96AH0 204 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PURGQ9UJV8 347 aaKnown RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 TIMM10BQ9Y5J6 103 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 CHD6Q8TD26 2715 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 INTS1Q8N201 2190 aaKnown RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 H0YIZ8 118 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 H7C2Y5 167 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 K7EP13 123 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 CHST1O43916 411 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 KNG1P01042 644 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 IFNA10P01566 189 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PI3P19957 117 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 CAV2P51636 162 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 S100A10P60903 97 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PRR20EP86478 221 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PRR20CP86479 221 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PRR20DP86480 221 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PRR20BP86481 221 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 PRR20AP86496 221 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 FAM27E3Q08E93 113 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 RAB35Q15286 201 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 C1QL2Q7Z5L3 287 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 LDLRAD3Q86YD5 345 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 TMED6Q8WW62 240 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 RNASE6Q93091 150 aaKnown RBP9.72□□□□□ -0.85
LINC00538-201ENST00000626109 OR10C1Q96KK4 312 aa9.72□□□□□ -0.85
LINC00538-201ENST00000626109 NCOA6Q14686 2063 aaPredicted RBP9.71□□□□□ -0.85
LINC00538-201ENST00000626109 MYO7BQ6PIF6 2116 aa9.71□□□□□ -0.85
LINC00538-201ENST00000626109 C16orf97H3BN30 126 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 JTBO76095 146 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 CST2P09228 141 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 ZNF25P17030 456 aaPredicted RBP9.71□□□□□ -0.86
LINC00538-201ENST00000626109 GABRR1P24046 479 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 UBE2NP61088 152 aaKnown RBP9.71□□□□□ -0.86
LINC00538-201ENST00000626109 IL15RAQ13261 267 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 CDSNQ15517 529 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 HAGHLQ6PII5 290 aaPredicted RBP9.71□□□□□ -0.86
LINC00538-201ENST00000626109 MTURNQ8N3F0 131 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 OR5L1Q8NGL2 311 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 FLYWCH2Q96CP2 140 aaKnown RBP9.71□□□□□ -0.86
LINC00538-201ENST00000626109 GGACTQ9BVM4 153 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 OR5AC2Q9NZP5 309 aa9.71□□□□□ -0.86
LINC00538-201ENST00000626109 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
LINC00538-201ENST00000626109 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 LRP5LA4QPB2 252 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 K7EPK0 472 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 ORM1P02763 201 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 FAM157CP0CG43 387 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 AKR1C3P42330 323 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 IAH1Q2TAA2 248 aaPredicted RBP9.7□□□□□ -0.86
LINC00538-201ENST00000626109 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 LGI3Q8N145 548 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 FAM71E2Q8N5Q1 922 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 CDH20Q9HBT6 801 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 ANXA10Q9UJ72 324 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 CRYM-AS1A6NIL9 109 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 OR5H1A6NKK0 313 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 OR5H8P0DN80 308 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 ARR3P36575 388 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 RBP2P50120 134 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 PCBD1P61457 104 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 RSPO1Q2MKA7 263 aaPredicted RBP9.7□□□□□ -0.86
LINC00538-201ENST00000626109 ABCA11PQ4W5N1 156 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 DHRS11Q6UWP2 260 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 SKA3Q8IX90 412 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 OR1F12Q8NHA8 337 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 RPEQ96AT9 228 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 BORCS8Q96FH0 119 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 SMIM8Q96KF7 97 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 CMSS1Q9BQ75 279 aaKnown RBP9.7□□□□□ -0.86
LINC00538-201ENST00000626109 SYT3Q9BQG1 590 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 AMDHD2Q9Y303 409 aa9.7□□□□□ -0.86
LINC00538-201ENST00000626109 FREM1Q5H8C1 2179 aa9.69□□□□□ -0.86
LINC00538-201ENST00000626109 ZNF850A8MQ14 1090 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms