RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-216ENST00000626000 C6orf62Q9GZU0 229 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-216ENST00000626000 SLC5A7Q9GZV3 580 aa11.05□□□□□ -0.64
SNRPA1-216ENST00000626000 TAS2R8Q9NYW2 309 aa11.05□□□□□ -0.64
SNRPA1-216ENST00000626000 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
SNRPA1-216ENST00000626000 IGKV1D-13A0A0B4J2D9 117 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 MEIS3P1A6NDR6 274 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 CTDSPLO15194 276 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 IGHG4P01861 327 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 IFNA6P05013 189 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 IGKV1-13P0DP09 117 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 HRH1P35367 487 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 UBE2KP61086 200 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 TSPAN5P62079 268 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 LAX1Q8IWV1 398 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 ARRDC1Q8N5I2 433 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 C11orf44Q8N8P7 122 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 SLIRPQ9GZT3 109 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 MTFP1Q9UDX5 166 aa11.04□□□□□ -0.64
SNRPA1-216ENST00000626000 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 TRAV41A0A0B4J266 112 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 SLC25A17O43808 307 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 ACTL6BO94805 426 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 CRYZL1O95825 349 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 HRASP01112 189 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 PMP2P02689 132 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 PF4V1P10720 104 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 S100A5P33763 92 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 TAS2R19P59542 299 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 FXYD4P59646 89 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 HSPB9Q9BQS6 159 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 ZNF2Q9BSG1 426 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 DCUN1D5Q9BTE7 237 aa11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 NXF2Q9GZY0 626 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-216ENST00000626000 LINC00473A8K010 186 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 J3QRK9 145 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 CTDSP2O14595 271 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 ATP6V0E1O15342 81 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 FCGR3BO75015 233 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 IGLV2-14P01704 120 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 CNTFRP26992 372 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 HLA-DMAP28067 261 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 RFX2P48378 723 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 CX3CL1P78423 397 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 IL18Q14116 193 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 MEF2DQ14814 521 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 NSUN5P1Q3KNT7 163 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 AKIRIN2Q53H80 203 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 TMEM65Q6PI78 240 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 ZNF329Q86UD4 541 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 LYSMD2Q8IV50 215 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 ABHD5Q8WTS1 349 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 C5orf30Q96GV9 206 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 RITA1Q96K30 269 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 RBM38Q9H0Z9 239 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 MIXL1Q9H2W2 232 aa11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-216ENST00000626000 CNIH1O95406 144 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 CA2P00918 260 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 FCER2P06734 321 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 FGF2P09038 288 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 ECI1P42126 302 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 UCP3P55916 312 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 RPL23AP62750 156 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 CFHR3Q02985 330 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 EIF4EBP1Q13541 118 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 TMEM229BQ8NBD8 167 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 OR52I2Q8NH67 350 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 ABHD1Q96SE0 405 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 CCL28Q9NRJ3 127 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 MGAM2Q2M2H8 2515 aa11.01□□□□□ -0.65
SNRPA1-216ENST00000626000 H3BUA1 57 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 GPR31O00270 319 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 TSPAN15O95858 294 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 IGLV2-23P01705 113 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 PF4P02776 101 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.65
SNRPA1-216ENST00000626000 MAS1LP35410 378 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 CDX1P47902 265 aaPredicted RBP11□□□□□ -0.65
SNRPA1-216ENST00000626000 FXYD3Q14802 87 aa11□□□□□ -0.65
SNRPA1-216ENST00000626000 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms