RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 VHLLQ6RSH7 139 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 ASCL5Q7RTU5 278 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 RBMXL3Q8N7X1 1067 aaKnown RBP6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 P2RX4Q99571 388 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 MAP1LC3BQ9GZQ8 125 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 HEATR1Q9H583 2144 aaKnown RBP6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 TPRP12270 2363 aaKnown RBP6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 F2RL2O00254 374 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 HPRT1P00492 218 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 IFNA1P01562 189 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 S100A6P06703 90 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 RAB11AP62491 216 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 PMS2P11Q13670 270 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 ADAM5Q6NVV9 412 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 FAM180AQ6UWF9 173 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 MRGPRGQ86SM5 289 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNRF1Q8ND25 227 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 ITLN1Q8WWA0 313 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 SLC39A9Q9NUM3 307 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 VAX2Q9UIW0 290 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
SND1-IT1-201ENST00000623342 C5orf52A6NGY3 159 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 FAM90A9PA6NNJ1 464 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 FCGR3BO75015 233 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 PROP1O75360 226 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 MBP02144 154 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 FGF7P21781 194 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 CEACAM8P31997 349 aaPredicted RBP6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 EDDM3BP56851 147 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 LOXL3P58215 753 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 GNB2P62879 340 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 VWC2Q2TAL6 325 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 KRTCAP3Q53RY4 240 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 HEPN1Q6WQI6 88 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 RPP25LQ8N5L8 163 aaKnown RBP6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 CA5BP1Q8WTZ4 195 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 LHX4Q969G2 390 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 QTRT1Q9BXR0 403 aaKnown RBP6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 SIRT7Q9NRC8 400 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 OR6C3Q9NZP0 311 aa6.9□□□□□ -1.3
SND1-IT1-201ENST00000623342 CXorf65A6NEN9 183 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 ZNF98A6NK75 572 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 ZNF727A8MUV8 499 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 B4DEV8 164 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 K7EM74 188 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 M0R1X1 148 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 KLK10O43240 276 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 RBFOX2O43251 390 aaKnown RBP eCLIP6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 LY86O95711 162 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 IGKV1D-33P01593 117 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 IGKV1-33P01594 117 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 OR9G9P0C7N8 305 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 GATA4P43694 442 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 SELENOVP59797 346 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 AARDQ4LEZ3 155 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 SPINK9Q5DT21 86 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 ACSM6Q6P461 480 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 RBMS3Q6XE24 437 aaKnown RBP6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 C1QL4Q86Z23 238 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 FAM57AQ8TBR7 257 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 IFI27L2Q9H2X8 130 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 RAB9BQ9NP90 201 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 CALYQ9NYX4 217 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 USF3Q68DE3 2245 aa6.9□□□□□ -1.31
SND1-IT1-201ENST00000623342 CACNA1DQ01668 2161 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 A8MXE2 369 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 IFNA17P01571 189 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 ZNF134P52741 427 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 OR2B8PP59922 312 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 PNRC1Q12796 327 aaPredicted RBP6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 HNF4GQ14541 408 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 PRAMEF5Q5TYX0 476 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 FAM222BQ8WU58 562 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 C12orf57Q99622 126 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 NPCDR1Q9BY65 106 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 RNF7Q9UBF6 113 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 A0A1W2PPE3 182 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 UBE2CO00762 179 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 ITGB1BP1O14713 200 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 CGB3P0DN86 165 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 CGB7P0DN87 165 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 MDKP21741 143 aaPredicted RBP6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 KIR2DS2P43631 304 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 RAB7AP51149 207 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 SPCS3P61009 180 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 ERVK-16P61578 105 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 RPS16P62249 146 aaKnown RBP6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 TNFAIP6P98066 277 aaPredicted RBP6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 TFF3Q07654 80 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 FAM27E3Q08E93 113 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 C17orf58Q2M2W7 97 aa6.89□□□□□ -1.31
SND1-IT1-201ENST00000623342 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms