RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-211ENST00000622020 GNB1P62873 340 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 EDDM3AQ14507 147 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 SSPNQ14714 243 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 LINC00596Q86U02 117 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 IMMP2LQ96T52 175 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 PYGO2Q9BRQ0 406 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 OR6C3Q9NZP0 311 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 PSG11Q9UQ72 335 aa13.21□□□□□ -0.29
NPHP4-211ENST00000622020 TMEM250H0YL14 139 aa13.21□□□□□ -0.3
NPHP4-211ENST00000622020 GCH1P30793 250 aa13.21□□□□□ -0.3
NPHP4-211ENST00000622020 MSMO1Q15800 293 aa13.21□□□□□ -0.3
NPHP4-211ENST00000622020 NRN1LQ496H8 165 aa13.21□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF705FA8MVS1 300 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 B4E171 279 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF705DP0CH99 300 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF705BP0CI00 300 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 TSPAN7P41732 249 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 CNN1P51911 297 aaKnown RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 SLC10A1Q14973 349 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 SLC25A40Q8TBP6 338 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 QTRT1Q9BXR0 403 aaKnown RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
NPHP4-211ENST00000622020 PAX1P15863 534 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 PRAMEF6Q5VXH4 476 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 SGMS2Q8NHU3 365 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
NPHP4-211ENST00000622020 A0A1W2PPV4 95 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 PMS2P5A8MQ11 134 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 PPP1CBP62140 327 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 ACTL10Q5JWF8 245 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 SNHG12Q9BXW3 62 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 PKIBQ9C010 78 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 RBFOX2O43251 390 aaKnown RBP eCLIP13.19□□□□□ -0.3
NPHP4-211ENST00000622020 LINC01551Q86U37 167 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 MSL2Q9HCI7 577 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
NPHP4-211ENST00000622020 A0A1B0GWJ7 208 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 SPINK4O60575 86 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 AGFG2O95081 481 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 MPV17P39210 176 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 SSMEM1Q8WWF3 244 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 RNF212BA8MTL3 300 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 PSG7Q13046 419 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 KCNIP4Q6PIL6 250 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 RNASEH2CQ8TDP1 164 aaKnown RBP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 ARG2P78540 354 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 TRA2AQ13595 282 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 ATP1A1-AS1Q5TC04 95 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 TGIF2LYQ8IUE0 185 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 STRADBQ9C0K7 418 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
NPHP4-211ENST00000622020 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
NPHP4-211ENST00000622020 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 FCGR3BO75015 233 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 CD82P27701 267 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 TDRG1Q3Y452 100 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-211ENST00000622020 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 MOB1BQ7L9L4 216 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 ANAPC16Q96DE5 110 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 MANBALQ9NQG1 85 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 NPIPB11E5RHQ5 1161 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 SLC17A3O00476 420 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 GCGP01275 180 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 IGHEP01854 428 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 MEOX1P50221 254 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 FABP6P51161 128 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 CATR1Q13166 79 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 MIC13Q5XKP0 118 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 ABHD12Q8N2K0 398 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
NPHP4-211ENST00000622020 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 CD1BP29016 333 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 ERVK11-1P61568 191 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 NOL4LQ96MY1 436 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-211ENST00000622020 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
NPHP4-211ENST00000622020 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 A6NNC1 897 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 AQP7O14520 342 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 SMPD2O60906 423 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 GGCTO75223 188 aaKnown RBP13.16□□□□□ -0.3
NPHP4-211ENST00000622020 MBP02144 154 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 CBLN1P23435 193 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 FBXW9Q5XUX1 488 aa13.16□□□□□ -0.3
NPHP4-211ENST00000622020 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms