RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 RAB29O14966 203 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 ENSAO43768 121 aaKnown RBP15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 IGKV1-39P01597 117 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 IGKV1D-39P04432 117 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 DSCR9P59020 149 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 MSMO1Q15800 293 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 BAP18Q8IXM2 172 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 LGI3Q8N145 548 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 PNKDQ8N490 385 aa15.15■□□□□ 0.02
SEMA6C-210ENST00000621728 SVEP1Q4LDE5 3571 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 RAB19A4D1S5 217 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 H0YIZ8 118 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 FGF16O43320 207 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 RBP4P02753 201 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 REG1BP48304 166 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF816Q0VGE8 651 aaPredicted RBP15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 SMCO1Q147U7 214 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 GGNBP1Q5YKI7 109 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 EIF5AL1Q6IS14 154 aaKnown RBP15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 MAPK1IP1LQ8NDC0 245 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 OR10X1Q8NGY0 326 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 OR9G1Q8NH87 305 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 TMEM56Q96MV1 263 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 LIN7CQ9NUP9 197 aaKnown RBP15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 TMEM56-RWDD3S4R434 201 aa15.14■□□□□ 0.01
SEMA6C-210ENST00000621728 TEX46H3BTG2 121 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 M0R1W7 72 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 CDS2O95674 445 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 Q5PR19 223 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 VMO1Q7Z5L0 202 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF695Q8IW36 515 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF596Q8TC21 504 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A096LNT2 108 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PRD5 423 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PRF3 423 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PRM7 423 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 FOXH1O75593 365 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 SERPINE2P07093 398 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 HCP5Q6MZN7 132 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF66Q6ZN08 573 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 SPAG16Q8N0X2 631 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 LINC00311Q8N616 119 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 FAM216AQ8WUB2 273 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 RNF141Q8WVD5 230 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 LINC00052Q96N35 136 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 HSD17B10Q99714 261 aaKnown RBP15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 CLEC7AQ9BXN2 247 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 SIRPDQ9H106 197 aa15.13■□□□□ 0.01
SEMA6C-210ENST00000621728 hCG_1809904A0A1W2PP81 198 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PPE2 198 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PR64 198 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A1W2PRV1 198 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 RNF212BA8MTL3 300 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 TOR1AO14656 332 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 USF1P22415 310 aaPredicted RBP15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 LPAR6P43657 344 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 SRPXP78539 464 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 CATR1Q13166 79 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 RAB32Q13637 225 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 IZUMO4Q1ZYL8 232 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 IAH1Q2TAA2 248 aaPredicted RBP15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 KRTAP1-3Q8IUG1 177 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF383Q8NA42 475 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 PCGF1Q9BSM1 259 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 CYTL1Q9NRR1 136 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 GAB2Q9UQC2 676 aa15.12■□□□□ 0.01
SEMA6C-210ENST00000621728 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 S1PR2O95136 353 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 IGLV1-47P01700 117 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 SLC25A16P16260 332 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF833PQ6ZTB9 187 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 LRRC75A-AS1Q8N1F1 130 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 KIR3DL3Q8N743 410 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 C8orf31Q8N9H6 132 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 TNFRSF14Q92956 283 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 MRPL20Q9BYC9 149 aaKnown RBP15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 PLEKHA2Q9HB19 425 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 CELSR1Q9NYQ6 3014 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 FCGR3BO75015 233 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 CT45A6P0DMU7 189 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 CT45A5P0DMU8 189 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 CT45A7P0DMV0 189 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 PRTN3P24158 256 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 DVL1P1P54792 670 aaPredicted RBP15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 HLA-DRB5Q30154 266 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 LDLRAD2Q5SZI1 272 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 DDB2Q92466 427 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 ST6GALNAC6Q969X2 333 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 MARC2Q969Z3 335 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 MBD6Q96DN6 1003 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 RRNAD1Q96FB5 475 aaKnown RBP15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 S1PR3Q99500 378 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 OR5AC2Q9NZP5 309 aa15.11■□□□□ 0.01
SEMA6C-210ENST00000621728 PIGBOS1A0A0B4J2F0 54 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 RNF223E7ERA6 249 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 IGKV1-5P01602 117 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 MMP9P14780 707 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 TUSC1Q2TAM9 212 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 GSKIPQ9P0R6 139 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms