RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 OR4A4PQ8NGN8 299 aa14.76□□□□□ -0.05
CDX1-202ENST00000616154 NUDCD2Q8WVJ2 157 aa14.76□□□□□ -0.05
CDX1-202ENST00000616154 CABLES2Q9BTV7 478 aa14.76□□□□□ -0.05
CDX1-202ENST00000616154 C11orf54Q9H0W9 315 aaPredicted RBP14.76□□□□□ -0.05
CDX1-202ENST00000616154 RBMX2Q9Y388 322 aaKnown RBP14.76□□□□□ -0.05
CDX1-202ENST00000616154 OR5H14A6NHG9 310 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 PROP1O75360 226 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 HLA-DRB1P01911 266 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 FCGR3AP08637 254 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 CD3GP09693 182 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 CT45A6P0DMU7 189 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 CT45A5P0DMU8 189 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 CT45A7P0DMV0 189 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 NAT1P18440 290 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 CD40LGP29965 261 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 GNG2P59768 71 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 ARFRP1Q13795 201 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 MMDQ15546 238 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 OR11H1Q8NG94 326 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 OR5AN1Q8NGI8 311 aa14.75□□□□□ -0.05
CDX1-202ENST00000616154 WDR12Q9GZL7 423 aaKnown RBP14.75□□□□□ -0.05
CDX1-202ENST00000616154 PPIFP30405 207 aaKnown RBP14.74□□□□□ -0.05
CDX1-202ENST00000616154 CEACAM6P40199 344 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 CBX5P45973 191 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 PPP5CP53041 499 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 SSBP1Q04837 148 aaKnown RBP14.74□□□□□ -0.05
CDX1-202ENST00000616154 OR52I2Q8NH67 350 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 RITA1Q96K30 269 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 UBE2E2Q96LR5 201 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 TSC22D3Q99576 134 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 MTFP1Q9UDX5 166 aa14.74□□□□□ -0.05
CDX1-202ENST00000616154 H0YJW9 148 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 NBR2O15453 112 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 FABP7O15540 132 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 RUNX1Q01196 453 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 KIAA0141Q14154 515 aaPredicted RBP14.73□□□□□ -0.05
CDX1-202ENST00000616154 ZNF846Q147U1 533 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 RPL39P5Q59GN2 51 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 TRIM63Q969Q1 353 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 ABHD14BQ96IU4 210 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 GNB4Q9HAV0 340 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 GAB2Q9UQC2 676 aa14.73□□□□□ -0.05
CDX1-202ENST00000616154 ZNF256Q9Y2P7 627 aaPredicted RBP14.73□□□□□ -0.05
CDX1-202ENST00000616154 TRBV6-7A0A0A0MS04 114 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 HSPA12AO43301 675 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 RBBP9O75884 186 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 IGLV1-40P01703 118 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 OR8U8P0C7N1 319 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 MC5RP33032 325 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 INSL3P51460 131 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 C5orf64Q2M2E5 130 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 PYDC2Q56P42 97 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 ASPHD1Q5U4P2 390 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 TMEM65Q6PI78 240 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 HUWE1Q7Z6Z7 4374 aaKnown RBP14.72□□□□□ -0.05
CDX1-202ENST00000616154 HOGA1Q86XE5 327 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 Q8N402 240 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 ZNF491Q8N8L2 437 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.72□□□□□ -0.05
CDX1-202ENST00000616154 FCAMRQ8WWV6 532 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 RNF5Q99942 180 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 CCDC32Q9BV29 185 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 KLK15Q9H2R5 256 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 OR51J1Q9H342 316 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 RDH8Q9NYR8 311 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 DNAH7Q8WXX0 4024 aa14.72□□□□□ -0.05
CDX1-202ENST00000616154 G3V318 75 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 I3L521 148 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 ATP6V0E1O15342 81 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 CNTFRP26992 372 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 MRPS15P82914 257 aaKnown RBP14.71□□□□□ -0.05
CDX1-202ENST00000616154 OR1N2Q8NGR9 330 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 SNAPC3Q92966 411 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 KLK11Q9UBX7 282 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 WSB1Q9Y6I7 421 aa14.71□□□□□ -0.05
CDX1-202ENST00000616154 IGHV7-81A0A0B4J1V7 117 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 RCVRNP35243 200 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 CRIP2P52943 208 aaPredicted RBP14.7□□□□□ -0.06
CDX1-202ENST00000616154 ZNF616Q08AN1 781 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 BAK1Q16611 211 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 GVQW1Q8N7I0 195 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 PARP11Q9NR21 331 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 WASHC3Q9Y3C0 194 aa14.7□□□□□ -0.06
CDX1-202ENST00000616154 IGKV1D-8A0A087WSZ0 117 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 TRAV41A0A0B4J266 112 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 GSTT2P0CG29 244 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 GSTT2BP0CG30 244 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 GNB1P62873 340 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 C19orf54Q5BKX5 351 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 IGSF11Q5DX21 431 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 LYSMD2Q8IV50 215 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 ASCL2Q99929 193 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 THAP7Q9BT49 309 aaPredicted RBP14.69□□□□□ -0.06
CDX1-202ENST00000616154 ZNF230Q9UIE0 474 aaPredicted RBP14.69□□□□□ -0.06
CDX1-202ENST00000616154 ZNF221Q9UK13 617 aa14.69□□□□□ -0.06
CDX1-202ENST00000616154 MEIS3P1A6NDR6 274 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 RRHO14718 337 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 RAB9AP51151 201 aa14.68□□□□□ -0.06
CDX1-202ENST00000616154 LIN54Q6MZP7 749 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms