RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RNFT1Q5M7Z0 435 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRAT1Q6PIZ9 186 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 USB1Q9BQ65 265 aaKnown RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 PSMG3Q9BT73 122 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SAMD10Q9BYL1 202 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 LILRA1O75019 489 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 PGA5P0DJD9 388 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 WNT5AP41221 380 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 HTD2P86397 168 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 RBPJQ06330 500 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF343Q6P1L6 599 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR4D5Q8NGN0 318 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 GUCD1Q96NT3 240 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF251Q9BRH9 671 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF71Q9NQZ8 489 aaPredicted RBP4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF320A2RRD8 509 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 S1PR2O95136 353 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 CD82P27701 267 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 GLRXP35754 106 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 RPL31P62899 125 aaKnown RBP4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF90Q03938 601 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 HERPUD1Q15011 391 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 PRR4Q16378 134 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM78BQ5VT40 261 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 WDYHV1Q96HA8 205 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 ADTRPQ96IZ2 230 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC35E1Q96K37 410 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR2V2Q96R30 315 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 LRFN3Q9BTN0 628 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 SIRT7Q9NRC8 400 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 TUBG2Q9NRH3 451 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 SSUH2Q9Y2M2 353 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 C11orf94C9JXX5 98 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 YIF1AO95070 293 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRGC2P03986 189 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR5G3P0C626 314 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR13A1Q8NGR1 328 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 RNF7Q9UBF6 113 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 COLCA2A8K830 154 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 F6UZH7 168 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 FBP1P09467 338 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR10A7Q8NGE5 316 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 TCF19Q9Y242 345 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 C17orf98A8MV24 154 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 B4DEV8 164 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMPRSS2O15393 492 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 C9orf152Q5JTZ5 239 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 RPP25LQ8N5L8 163 aaKnown RBP4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 ACY3Q96HD9 319 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 OPN3Q9H1Y3 402 aaPredicted RBP4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZDHHC11Q9H8X9 412 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 WFDC1Q9HC57 220 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 PLXNB3Q9ULL4 1909 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRGV8A0A0C4DH27 118 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 NKX6-3A6NJ46 265 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 IFNL4K9M1U5 179 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 CRXO43186 299 aaPredicted RBP4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 FABP4P15090 132 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 EGR1P18146 543 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 FOXF2Q12947 444 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 CYP2G1PQ6ZSU1 146 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 SGMS2Q8NHU3 365 aa4.76□□□□□ -1.65
SYNCRIP-204ENST00000616122 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CDX4O14627 284 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGKV1-5P01602 117 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CHRNB4P30926 498 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 TAS2R45P59539 299 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPCS3P61009 180 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF146Q15072 292 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF506Q5JVG8 444 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF525Q8N782 197 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 RBKSQ9H477 322 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 AAMDCQ9H7C9 122 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 TUBA4BQ9H853 241 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 FLNCQ14315 2725 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 A0A0G2JRQ6 117 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 HPRT1P00492 218 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGHV1-2P23083 117 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 ERHP84090 104 aaKnown RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 PLGLAQ15195 96 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 RTL8BQ17RB0 113 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 STUMQ69YW2 141 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 MYPOPQ86VE0 399 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 C9orf106Q8NAJ2 232 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR51G1Q8NGK1 321 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 TREM2Q9NZC2 230 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 NAT8Q9UHE5 227 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRAV20A0A0B4J274 112 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 C16orf97H3BN30 126 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 SMPD2O60906 423 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 PRB4P10163 310 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 KIR2DL2P43627 348 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 GNG10P50151 68 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 C20orf204Q6ZNR8 217 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 Q6ZS49 121 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms