RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GRPP07492 148 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 LIFP15018 202 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 CLDN15P56746 228 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 LPAL2Q16609 132 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
MSH6-214ENST00000616033 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 OR2D2Q9H210 308 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 TPPP2P59282 170 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 GAGE1Q13065 139 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 ZNF585BQ52M93 769 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
MSH6-214ENST00000616033 OR5AU1Q8NGC0 362 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 WDYHV1Q96HA8 205 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 PSMG3Q9BT73 122 aaPredicted RBP11.11□□□□□ -0.63
MSH6-214ENST00000616033 HINT2Q9BX68 163 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 C19orf25Q9UFG5 118 aaPredicted RBP11.11□□□□□ -0.63
MSH6-214ENST00000616033 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 TRAV24A0A0B4J272 114 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 ACTL6BO94805 426 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 CD46P15529 392 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 PAX1P15863 534 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 GDF1P27539 372 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 CCL7P80098 99 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 LOXL4Q96JB6 756 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 GPR35Q9HC97 309 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 SERTAD4Q9NUC0 356 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 DLL3Q9NYJ7 618 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 NKX6-3A6NJ46 265 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 UMODP07911 640 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 AMTP48728 403 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 SSR4P51571 173 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 FXYD3Q14802 87 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 MSMO1Q15800 293 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 TMEM183BQ1AE95 376 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 FAM58AQ8N1B3 248 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 OR5A2Q8NGI9 324 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 RNF2Q99496 336 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 MRPL18Q9H0U6 180 aaKnown RBP11.1□□□□□ -0.63
MSH6-214ENST00000616033 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 CACNA1GO43497 2377 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 S1PR2O95136 353 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 PSG1P11464 419 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 C3AR1Q16581 482 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 SIGLECL1Q8N7X8 197 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 C12orf49Q9H741 205 aa11.1□□□□□ -0.63
MSH6-214ENST00000616033 TNCP24821 2201 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 CTXN2P0C2S0 81 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 RAC1P63000 192 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 HTD2P86397 168 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 HLA-DRB5Q30154 266 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 ABHD14BQ96IU4 210 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 GCM1Q9NP62 436 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 TMEM250H0YL14 139 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 NDUFB8O95169 186 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 NXPH1P58417 271 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 ASCL4Q6XD76 172 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 FADS6Q8N9I5 356 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 OR52L2PQ8NGH6 319 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 SFRP2Q96HF1 295 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 IL19Q9UHD0 177 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 DIRC3C9JPN6 131 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
MSH6-214ENST00000616033 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
MSH6-214ENST00000616033 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 CPT1CQ8TCG5 803 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
MSH6-214ENST00000616033 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
MSH6-214ENST00000616033 ITGB1BP1O14713 200 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 CBR3O75828 277 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 ARL14EPLP0DKL9 152 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 CDKN1BP46527 198 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 RPL30P62888 115 aaKnown RBP11.08□□□□□ -0.64
MSH6-214ENST00000616033 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.64
MSH6-214ENST00000616033 TPTE2P1Q5T6R2 138 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 OR10G8Q8NGN5 311 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 LIN7CQ9NUP9 197 aaKnown RBP11.08□□□□□ -0.64
MSH6-214ENST00000616033 POLEQ07864 2286 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 P04436 131 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms