RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 TMEM45BQ96B21 275 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 TXN2Q99757 166 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 CXXC4Q9H2H0 198 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 FOXJ2Q9P0K8 574 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 U3KQA8 63 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 RIF1Q5UIP0 2472 aaKnown RBP10.59□□□□□ -0.71
MSH6-213ENST00000614496 MARCH11A6NNE9 402 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 ATP5G3P48201 142 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 CLDN18P56856 261 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 ACY3Q96HD9 319 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 LINC00470Q9BZP3 86 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 PAM16Q9Y3D7 125 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 CRISP2P16562 243 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 GPX4P36969 197 aaPredicted RBP10.59□□□□□ -0.71
MSH6-213ENST00000614496 IER3P46695 156 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 KCNIP2Q9NS61 270 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 CBLN4Q9NTU7 201 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 ADAMTS9Q9P2N4 1935 aa10.59□□□□□ -0.71
MSH6-213ENST00000614496 IGHV2-70P01814 119 aa10.58□□□□□ -0.71
MSH6-213ENST00000614496 TBX15Q96SF7 602 aa10.58□□□□□ -0.71
MSH6-213ENST00000614496 ATG101Q9BSB4 218 aa10.58□□□□□ -0.71
MSH6-213ENST00000614496 QTRT1Q9BXR0 403 aaKnown RBP10.58□□□□□ -0.71
MSH6-213ENST00000614496 TPPP2P59282 170 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 PCSK4Q6UW60 755 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 SPSB4Q96A44 273 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 PXMP4Q9Y6I8 212 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 ZNF503-AS2A6NEH8 195 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 PAX5Q02548 391 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
MSH6-213ENST00000614496 H1FXQ92522 213 aaKnown RBP10.58□□□□□ -0.72
MSH6-213ENST00000614496 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
MSH6-213ENST00000614496 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
MSH6-213ENST00000614496 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 SSTP61278 116 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 ZBTB34Q8NCN2 500 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 NUP210LQ5VU65 1888 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 NEURL1O76050 574 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 CEACAM1P13688 526 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 GFRA1P56159 465 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
MSH6-213ENST00000614496 PSG7Q13046 419 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 PSG5Q15238 335 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 VN1R17PQ8TDU5 208 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 RNF138Q8WVD3 245 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 DDA1Q9BW61 102 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 PCNX1Q96RV3 2341 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 FAM90A26D6RGX4 464 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 PDE6DO43924 150 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 PLA2G5P39877 138 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 RHOBP62745 196 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
MSH6-213ENST00000614496 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 VAMP8Q9BV40 100 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 PROCRQ9UNN8 238 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 RNF115Q9Y4L5 304 aa10.57□□□□□ -0.72
MSH6-213ENST00000614496 SNURFLB1AK76 121 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 OR5G3P0C626 314 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 C1QTNF9P0C862 333 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 PRDX2P32119 198 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 CCKARP32238 428 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 ZNF331Q9NQX6 463 aaPredicted RBP10.56□□□□□ -0.72
MSH6-213ENST00000614496 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 DKK1O94907 266 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 CLDN14O95500 239 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 AMBPP02760 352 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 MPV17P39210 176 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 GNG4P50150 75 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 ZNF726P1Q15940 193 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
MSH6-213ENST00000614496 SSX7Q7RTT5 188 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 TCF23Q7RTU1 214 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 OR13A1Q8NGR1 328 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 M0R143 59 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 PSPNO60542 156 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 RBMXL3Q8N7X1 1067 aaKnown RBP10.56□□□□□ -0.72
MSH6-213ENST00000614496 OR1L6Q8NGR2 347 aa10.56□□□□□ -0.72
MSH6-213ENST00000614496 CDX2Q99626 313 aaPredicted RBP10.56□□□□□ -0.72
MSH6-213ENST00000614496 H0Y8G0 127 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 ZNF25P17030 456 aaPredicted RBP10.55□□□□□ -0.72
MSH6-213ENST00000614496 CBLN1P23435 193 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 KIAA1644Q3SXP7 199 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 RPL39P5Q59GN2 51 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 CYB5R2Q6BCY4 276 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 FAM216AQ8WUB2 273 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 WDYHV1Q96HA8 205 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 FGF23Q9GZV9 251 aaPredicted RBP10.55□□□□□ -0.72
MSH6-213ENST00000614496 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 SLC17A3O00476 420 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 RAB29O14966 203 aa10.55□□□□□ -0.72
MSH6-213ENST00000614496 AMTP48728 403 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms