RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	C17orf98	A8MV24	154 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	CRISP2	P16562	243 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	BRS3	P32247	399 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	OPRK1	P41145	380 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	CYB561	P49447	251 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	TNFSF10	P50591	281 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	BRWD1-AS2	P59051	145 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130		Q0VFX4	171 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	WDR86	Q86TI4	376 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	SCCPDH	Q8NBX0	429 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	IL36B	Q9NZH7	164 aa		11.5	□□□□□ -0.57
UBE2F-223	ENST00000612130	PGPEP1L	A6NFU8	196 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	CXorf1	O96002	111 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	RPS16	P62249	146 aa	Known RBP	11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	CYB5R2	Q6BCY4	276 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	PPP1R32	Q7Z5V6	425 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR5AU1	Q8NGC0	362 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	HLA-C	Q95604	372 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	TMEM204	Q9BSN7	226 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	PATZ1	Q9HBE1	687 aa	Known RBP	11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	LPAR2	Q9HBW0	351 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	CBY1	Q9Y3M2	126 aa		11.49	□□□□□ -0.57
UBE2F-223	ENST00000612130	TRBV9	A0A0B4J1U6	114 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	C12orf77	C9JDV5	145 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130		J3QW42	95 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	RBMXL2	O75526	392 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	SERF1A	O75920	110 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	NEURL1	O76050	574 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	NXPH2	O95156	264 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	STAG3L2	P0CL84	134 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	STAG3L3	P0CL85	134 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	CCL4	P13236	92 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	CLDN18	P56856	261 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	ZNF90	Q03938	601 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130		Q0VG73	95 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	IGFBP7	Q16270	282 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	AARD	Q4LEZ3	155 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	GCSAML	Q5JQS6	135 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	NINJ1	Q92982	152 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	HSPB9	Q9BQS6	159 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	QTRT1	Q9BXR0	403 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	MRPL18	Q9H0U6	180 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	LY96	Q9Y6Y9	160 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	ZNF407	Q9C0G0	2248 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	SDK2	Q58EX2	2172 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	SCO2	A0A1W2PP80	73 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	OOEP	A6NGQ2	149 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130		A6NNC1	897 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	IL6R	P08887	468 aa	Predicted RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	NPS	P0C0P6	89 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	ARL14EPL	P0DKL9	152 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	BMP5	P22003	454 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	CBLN1	P23435	193 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	EDDM3B	P56851	147 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	RPP30	P78346	268 aa	Known RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	SRY	Q05066	204 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	LYSMD4	Q5XG99	296 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR2J1	Q9GZK6	312 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	GP6	Q9HCN6	339 aa		11.48	□□□□□ -0.57
UBE2F-223	ENST00000612130	HAND1	O96004	215 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	MT-CO3	P00414	261 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	SLC35E4	Q6ICL7	350 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR4B1	Q8NGF8	309 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	NANOS1	Q8WY41	292 aa	Known RBP	11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	B4GALT7	Q9UBV7	327 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	CNTRL	Q7Z7A1	2325 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	FAM90A9P	A6NNJ1	464 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130		C9JCJ5	164 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130		K7ESF4	209 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	OTX2	P32243	289 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	CDKN1A	P38936	164 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	TGFBR3	Q03167	851 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	ZNF718	Q3SXZ3	478 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR52L2P	Q8NGH6	319 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	OCC1	Q8TAD7	63 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	C11orf52	Q96A22	123 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	HSD17B10	Q99714	261 aa	Known RBP	11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	PAM16	Q9Y3D7	125 aa		11.47	□□□□□ -0.57
UBE2F-223	ENST00000612130	SPEG	Q15772	3267 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130		A8MXE2	369 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	NTN3	O00634	580 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	HBZ	P02008	142 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	COMP	P49747	757 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	LGALS4	P56470	323 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR1C1	Q15619	314 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	TDRG1	Q3Y452	100 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	SPINK9	Q5DT21	86 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	BAGE3	Q86Y29	109 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	BAGE2	Q86Y30	109 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	OR1L6	Q8NGR2	347 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	FAM173A	Q9BQD7	235 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	SAMD10	Q9BYL1	202 aa		11.46	□□□□□ -0.57
UBE2F-223	ENST00000612130	CACNA1E	Q15878	2313 aa		11.46	□□□□□ -0.58
UBE2F-223	ENST00000612130	CD33	P20138	364 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	TMPRSS3	P57727	454 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	MRPS11	P82912	194 aa	Known RBP	11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	GABRA6	Q16445	453 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms