RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	KLHDC1	Q8N7A1	406 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	OR2V2	Q96R30	315 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	ATG101	Q9BSB4	218 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	WDR61	Q9GZS3	305 aa	Known RBP	11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	PCNX2	A6NKB5	2137 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	MKRN2OS	H3BPM6	223 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	BMPR1B	O00238	502 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	CA11	O75493	328 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	VMA21	Q3ZAQ7	101 aa		11.79	□□□□□ -0.52
MUC1-223	ENST00000611571	CUL9	Q8IWT3	2517 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	IGKV1-27	A0A075B6S5	117 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	hADV38S2	A0JD32	116 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	COLCA2	A8K830	154 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	AGA	P20933	346 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	MPV17	P39210	176 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	CSN1S1	P47710	185 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	HCP5	Q6MZN7	132 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	IMMP2L	Q96T52	175 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	ACACB	O00763	2458 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	RNF224	P0DH78	156 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	ARL14EPL	P0DKL9	152 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	RAB7A	P51149	207 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	FAM89B	Q8N5H3	189 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	BCL2L2	Q92843	193 aa	Predicted RBP	11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	C17orf98	A8MV24	154 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571		M0R2Z0	102 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	CBLN1	P23435	193 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	UCP1	P25874	307 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	OTX1	P32242	354 aa	Predicted RBP	11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	TFF3	Q07654	80 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	RPL39P5	Q59GN2	51 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	FAM214B	Q7L5A3	538 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	ZNF441	Q8N8Z8	693 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	ITLN1	Q8WWA0	313 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	PRDM14	Q9GZV8	571 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	VSIR	Q9H7M9	311 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	DEPP	Q9NTK1	212 aa		11.78	□□□□□ -0.52
MUC1-223	ENST00000611571	PQLC2L	A1A4F0	135 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	SLC17A3	O00476	420 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	RRH	O14718	337 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	HTR1D	P28221	377 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	FAM131C	Q96AQ9	280 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	IMMP1L	Q96LU5	166 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	NPVF	Q9HCQ7	196 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	GLRX2	Q9NS18	164 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	FOXJ2	Q9P0K8	574 aa		11.77	□□□□□ -0.52
MUC1-223	ENST00000611571	ODAM	A1E959	279 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	CRYBB3	P26998	211 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	UCP3	P55916	312 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	ONECUT1	Q9UBC0	465 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	WASHC3	Q9Y3C0	194 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	C12orf77	C9JDV5	145 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	ADH4	P08319	380 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	PRB4	P10163	310 aa	Predicted RBP	11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	PTTG1IP	P53801	180 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	RPL31	P62899	125 aa	Known RBP	11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	PQLC2	Q6ZP29	291 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	RPE	Q96AT9	228 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	THADA	Q6YHU6	1953 aa		11.77	□□□□□ -0.53
MUC1-223	ENST00000611571	PDE6D	O43924	150 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	OR2J3	O76001	311 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	CXorf1	O96002	111 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	KCNMB1	Q16558	191 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	ABLIM2	Q6H8Q1	611 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	PRSS3P2	Q8NHM4	247 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	COLQ	Q9Y215	455 aa	Predicted RBP	11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	SMIM15	Q7Z3B0	74 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	ZIC4	Q8N9L1	334 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	PRR19	A6NJB7	356 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	FAM90A27P	A6NNH2	459 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	DIRC3	C9JPN6	131 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	GATA2	P23769	480 aa	Predicted RBP	11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	CCKAR	P32238	428 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	MRPL14	Q6P1L8	145 aa	Known RBP	11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	INO80C	Q6PI98	192 aa	Predicted RBP	11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	LHFPL1	Q86WI0	220 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	OR4C5	Q8NGB2	326 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	GATAD1	Q8WUU5	269 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	WBP1	Q96G27	269 aa		11.76	□□□□□ -0.53
MUC1-223	ENST00000611571	TMEM108	Q6UXF1	575 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	FA2H	Q7L5A8	372 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	DOLPP1	Q86YN1	238 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	ZNF596	Q8TC21	504 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	OR5P3	Q8WZ94	311 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	REPIN1	Q9BWE0	567 aa	Known RBP	11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	QTRT1	Q9BXR0	403 aa	Known RBP	11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	CHRNA10	Q9GZZ6	450 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	OR51B2	Q9Y5P1	312 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	HGFAC	Q04756	655 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	ZNF506	Q5JVG8	444 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	PDPN	Q86YL7	162 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	C1QTNF9B	B2RNN3	333 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	NEURL1	O76050	574 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	CSRP2	Q16527	193 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	ST6GALNAC3	Q8NDV1	305 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	OR2T6	Q8NHC8	308 aa		11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.75	□□□□□ -0.53
MUC1-223	ENST00000611571	SAP30L	Q9HAJ7	183 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms