RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CCDC32Q9BV29 185 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 RNASE7Q9H1E1 156 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 LYRM2Q9NU23 88 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAIMQ9NVQ4 179 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 HES2Q9Y543 173 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 S4R3C0 116 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 AHDC1Q5TGY3 1603 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 NALCNQ8IZF0 1738 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 KIF15Q9NS87 1388 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 MYH2Q9UKX2 1941 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 HECW2Q9P2P5 1572 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF609O15014 1411 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 SSH2Q76I76 1423 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 YEATS2Q9ULM3 1422 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A087WUU8 490 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 UQCRHLA0A096LP55 91 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAPPC13A5PLN9 417 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 CCDC160A6NGH7 325 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 UPK1AO00322 258 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 DEGS1O15121 323 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TPST1O60507 370 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 PTHP01270 115 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 UQCRHP07919 91 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 METTL15P1P0C7V9 234 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ATF1P18846 271 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 KDELR1P24390 212 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 CNTFRP26992 372 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 DDTP30046 118 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 AGTR1P30556 359 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 PHBP35232 272 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 GLRXP35754 106 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 GGT2P36268 569 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 RBP2P50120 134 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 RRAS2P62070 204 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TNFAIP6P98066 277 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF616Q08AN1 781 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 EBPQ15125 230 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 MORN2Q502X0 79 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TNFAIP8L3Q5GJ75 292 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 Q6ZSR6 202 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 GOLT1AQ6ZVE7 132 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 NAA40Q86UY6 237 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 C12orf45Q8N5I9 185 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF645Q8N7E2 425 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC30A7Q8NEW0 376 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 OR9I1Q8NGQ6 314 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 JOSD2Q8TAC2 188 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 RXFP4Q8TDU9 374 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 THEM6Q8WUY1 208 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 CYGBQ8WWM9 190 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ACY3Q96HD9 319 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 REEP6Q96HR9 211 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 OR4K3Q96R72 315 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 OR7D2Q96RA2 312 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 PRSS27Q9BQR3 290 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 VPS25Q9BRG1 176 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 DOHHQ9BU89 302 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 GNB1LQ9BYB4 327 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TBL1XR1Q9BZK7 514 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM126AQ9H061 195 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM222Q9H0R3 208 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 OR51I2Q9H344 312 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 C14orf105Q9NVL8 296 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 SPANXCQ9NY87 97 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 COPZ2Q9P299 210 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 PKIGQ9Y2B9 76 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF780BQ9Y6R6 833 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 UHRF1BP1LA0JNW5 1464 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 RAPGEF2Q9Y4G8 1499 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 TTC37Q6PGP7 1564 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 ROBO3Q96MS0 1386 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
SMCHD1-213ENST00000609587 NUP214P35658 2090 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 PLCH2O75038 1416 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 SIGLEC1Q9BZZ2 1709 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 IGKV1-27A0A075B6S5 117 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 MEIKINA0A087WXM9 373 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 BORCS7-ASMTA0A0B4J1R7 106 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A0J9YY10 115 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A1B0GX78 115 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 hADV38S2A0JD32 116 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 E7EQ34 232 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 TP53I11O14683 189 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 HMGB3O15347 200 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 OR2A4O95047 310 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 LGALS1P09382 135 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 CCL1P22362 96 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 RPS3P23396 243 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 BLVRBP30043 206 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 EVX1P49640 407 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 TPI1P60174 286 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 DYNLL1P63167 89 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 GNG5P63218 68 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 PSG9Q00887 426 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 INCA1Q0VD86 236 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 ENDOGQ14249 297 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 OR8B8Q15620 311 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 Q499Y3 187 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms