RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NEIL1Q96FI4 390 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 COL4A5P29400 1685 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.48□□□□□ -1.21
COMMD3-215ENST00000602574 PTGESO14684 152 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 OR7C1O76099 320 aaPredicted RBP7.48□□□□□ -1.21
COMMD3-215ENST00000602574 PMCHP20382 165 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 PTGDSP41222 190 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 EDDM3AQ14507 147 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 SAMD5Q5TGI4 173 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 PIANPQ8IYJ0 282 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 TSKUQ8WUA8 353 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 RNF166Q96A37 237 aaPredicted RBP7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 HRASLS2Q9NWW9 162 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 CASP8AP2Q9UKL3 1982 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PQF6 199 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 C2orf70A6NJV1 201 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 FCN1O00602 326 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 CXCL10P02778 98 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 RPL27P61353 136 aaKnown RBP7.48□□□□□ -1.21
COMMD3-215ENST00000602574 RHOAP61586 193 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF74Q16587 644 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM211Q6ICI0 200 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 LILRA6Q6PI73 481 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 RNF152Q8N8N0 203 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 OR2A5Q96R48 311 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 WFDC6Q9BQY6 131 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 ABT1Q9ULW3 272 aaKnown RBP7.48□□□□□ -1.21
COMMD3-215ENST00000602574 LOXL2Q9Y4K0 774 aa7.48□□□□□ -1.21
COMMD3-215ENST00000602574 OR4C46A6NHA9 309 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 F2Z2F3 143 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 B3GALT2O43825 422 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CXorf1O96002 111 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 NTF3P20783 257 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 NTF4P34130 210 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TNFAIP6P98066 277 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CXCL9Q07325 125 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CLEC12BQ2HXU8 276 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 RPEL1Q2QD12 228 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 FAM57BQ71RH2 274 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 PPP1R27Q86WC6 154 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 ST8SIA1Q92185 356 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM70Q9BUB7 260 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 DKK4Q9UBT3 224 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CPAMD8Q8IZJ3 1885 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CXorf51AA0A1B0GTR3 108 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TNFSF12O43508 249 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 EPPINO95925 133 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CRYGDP07320 174 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 IFITM1P13164 125 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 HOXD9P28356 352 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 PPIFP30405 207 aaKnown RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 NANOS3P60323 173 aaKnown RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 CX3CL1P78423 397 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 DIAPH2-AS1Q14236 149 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TCF23Q7RTU1 214 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 RBMXL3Q8N7X1 1067 aaKnown RBP7.47□□□□□ -1.21
COMMD3-215ENST00000602574 BCORP1Q8N888 145 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM178AQ8NBL3 297 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 OR10G8Q8NGN5 311 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 DHDHQ9UQ10 334 aa7.47□□□□□ -1.21
COMMD3-215ENST00000602574 A0A087X0K7 114 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 FAM90A27PA6NNH2 459 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 SDCBPO00560 298 aaPredicted RBP7.46□□□□□ -1.22
COMMD3-215ENST00000602574 PRKNO60260 465 aaPredicted RBP7.46□□□□□ -1.22
COMMD3-215ENST00000602574 APOA2P02652 100 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 CSN3P07498 182 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 ORM2P19652 201 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 ACRV1P26436 265 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 DLX6P56179 175 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 MBNL2Q5VZF2 373 aaKnown RBP7.46□□□□□ -1.22
COMMD3-215ENST00000602574 LCN12Q6JVE5 192 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 Q6ZS49 121 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 RFLNBQ8N5W9 214 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 OR10G7Q8NGN6 311 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 SSC4DQ8WTU2 575 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 RPEQ96AT9 228 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 RAB40CQ96S21 281 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 C20orf78Q9BR46 151 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 WSB2Q9NYS7 404 aaPredicted RBP7.46□□□□□ -1.22
COMMD3-215ENST00000602574 PLXNB3Q9ULL4 1909 aa7.46□□□□□ -1.22
COMMD3-215ENST00000602574 SLC25A14O95258 325 aaPredicted RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 IGHV3-7P01780 117 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 RPL7P18124 248 aaKnown RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 GABRG2P18507 467 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 CBLN1P23435 193 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PSMB3P49720 205 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms