RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	TMEM50B	P56557	158 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	UBE2K	P61086	200 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	TMEM61	Q8N0U2	210 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	DYNLRB2	Q8TF09	96 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	C12orf4	Q9NQ89	552 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	PLEKHJ1	Q9NW61	149 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	SDHAF2	Q9NX18	166 aa		13.65	□□□□□ -0.22
IRF3-231	ENST00000602190	EFCAB10	A6NFE3	127 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	SOCS1	O15524	211 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	DIRAS3	O95661	229 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	CEL	P19835	753 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	INSL4	Q14641	139 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	GPHB5	Q86YW7	130 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	TTC9C	Q8N5M4	171 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	NECAP1	Q8NC96	275 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	SETD6	Q8TBK2	473 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	CABLES2	Q9BTV7	478 aa		13.64	□□□□□ -0.23
IRF3-231	ENST00000602190	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.63	□□□□□ -0.23
IRF3-231	ENST00000602190		A0A0J9YWU9	116 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	PNMA8C	A0A1B0GUJ8	204 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	TMEM213	A2RRL7	107 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	CXorf65	A6NEN9	183 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	NDUFB8	O95169	186 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	BPNT1	O95861	308 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	APELA	P0DMC3	54 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	CBLN1	P23435	193 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	SERPINB10	P48595	397 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	ATP5G2	Q06055	141 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	MED21	Q13503	144 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	TTC23	Q5W5X9	447 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	LGALS9C	Q6DKI2	356 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190		Q6ZWC4	215 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	SLC16A13	Q7RTY0	426 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	GGH	Q92820	318 aa		13.63	□□□□□ -0.23
IRF3-231	ENST00000602190	PRH1	P02810	166 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	RRAS	P10301	218 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	ST3GAL4	Q11206	333 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	PMS2P11	Q13670	270 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	GUCA2B	Q16661	112 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	GLT8D1	Q68CQ7	371 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	LYG2	Q86SG7	212 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	SETD9	Q8NE22	299 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	OR4A4P	Q8NGN8	299 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	MLX	Q9UH92	298 aa		13.62	□□□□□ -0.23
IRF3-231	ENST00000602190	TRDC	B7Z8K6	153 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	SHOX	O15266	292 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	GGCT	O75223	188 aa	Known RBP	13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	TUSC2	O75896	110 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	WNT4	P56705	351 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	TNXA	Q16473	311 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	LAIR2	Q6ISS4	152 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	CACNG8	Q8WXS5	425 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	CCDC140	Q96MF4	163 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	OR2D2	Q9H210	308 aa		13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	SMPD3	Q9NY59	655 aa	Predicted RBP	13.61	□□□□□ -0.23
IRF3-231	ENST00000602190	RYR1	P21817	5038 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	TRBV6-7	A0A0A0MS04	114 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	PPP5D1	E7EU14	171 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	C8orf88	P0DMB2	117 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	DUT	P33316	252 aa	Known RBP	13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	BMI1	P35226	326 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	RTL8B	Q17RB0	113 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	C15orf32	Q32M92	178 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	VMA21	Q3ZAQ7	101 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	ACSM3	Q53FZ2	586 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	OR6M1	Q8NGM8	313 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	OSR1	Q8TAX0	266 aa	Predicted RBP	13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	PHB2	Q99623	299 aa		13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.6	□□□□□ -0.23
IRF3-231	ENST00000602190	TRAV25	A0A0B4J276	109 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	TEX22	C9J3V5	150 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	DEDD	O75618	318 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	OR2C1	O95371	312 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	HLA-A	P01891	365 aa	Known RBP	13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	PLAC9	Q5JTB6	97 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	ZNF57	Q68EA5	555 aa	Predicted RBP	13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	CEACAM19	Q7Z692	300 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	PQLC1	Q8N2U9	271 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	ZNF555	Q8NEP9	628 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	FANCD2OS	Q96PS1	177 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	GFI1	Q99684	422 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	SPIN2A	Q99865	258 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	SPIN2B	Q9BPZ2	258 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	URM1	Q9BTM9	101 aa	Known RBP	13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	PECR	Q9BY49	303 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	ZNF257	Q9Y2Q1	563 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	KLK5	Q9Y337	293 aa	Predicted RBP	13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	VPS13D	Q5THJ4	4388 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	DNAH6	Q9C0G6	4158 aa		13.59	□□□□□ -0.23
IRF3-231	ENST00000602190	LINC00473	A8K010	186 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	UCHL1	P09936	223 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	CDK10	Q15131	360 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	IDO2	Q6ZQW0	420 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	MS4A15	Q8N5U1	240 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	NANOGP1	Q8N7R0	232 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	OR52B4	Q8NGK2	314 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	GATAD1	Q8WUU5	269 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	ARHGAP5-AS1	Q96IT6	56 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	ADTRP	Q96IZ2	230 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms