RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 MEIS3P1A6NDR6 274 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 A8MZ25 164 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 C12orf77C9JDV5 145 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 HSPA12AO43301 675 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 SSX5O60225 188 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 TPPPO94811 219 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 NAPSAO96009 420 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 FCGR3AP08637 254 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 LGALS1P09382 135 aaKnown RBP7.63□□□□□ -1.19
HIF3A-219ENST00000600879 RCC1P18754 421 aaPredicted RBP7.63□□□□□ -1.19
HIF3A-219ENST00000600879 DTYMKP23919 212 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 IL3RAP26951 378 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 CHRNA7P36544 502 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 SPANXN2Q5MJ10 180 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 C6orf183Q5T699 404 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF880Q6PDB4 577 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 TRAT1Q6PIZ9 186 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 MOB1BQ7L9L4 216 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 OR8H1Q8NGG4 311 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 ARL11Q969Q4 196 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 RITA1Q96K30 269 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 TUBA4BQ9H853 241 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 Q9N2K0 584 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 TPSG1Q9NRR2 321 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 KCNIP1Q9NZI2 227 aa7.63□□□□□ -1.19
HIF3A-219ENST00000600879 TRBV6-6A0A0A6YYG2 114 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 SULT1C2O00338 296 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 SOX15O60248 233 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 GZMHP20718 246 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ETV6P41212 452 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 CBX5P45973 191 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 MRPS10P82664 201 aaKnown RBP7.62□□□□□ -1.19
HIF3A-219ENST00000600879 PYDC2Q56P42 97 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 OR10A7Q8NGE5 316 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 OR10V1Q8NGI7 309 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 IL17DQ8TAD2 202 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 GPX8Q8TED1 209 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 MAFIPQ8WZ33 124 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ABHD1Q96SE0 405 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 SOSTQ9BQB4 213 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ST6GALNAC5Q9BVH7 336 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ELOVL1Q9BW60 279 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 SCPEP1Q9HB40 452 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 TAF9BQ9HBM6 251 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 RAB9BQ9NP90 201 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 IFT46Q9NQC8 304 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 MBNL3Q9NUK0 354 aaKnown RBP7.62□□□□□ -1.19
HIF3A-219ENST00000600879 GFOD1Q9NXC2 390 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF230Q9UIE0 474 aaPredicted RBP7.62□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF580Q9UK33 172 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 MGAT4AQ9UM21 535 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 FBXO7Q9Y3I1 522 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 V9GYH0 126 aa7.62□□□□□ -1.19
HIF3A-219ENST00000600879 IGHV7-81A0A0B4J1V7 117 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 TRDCB7Z8K6 153 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 C15orf65H3BRN8 121 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 GABARAPH6UMI1 98 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 CTDSPLO15194 276 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 SPINT2O43291 252 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 ORC5O43913 435 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 BRI3O95415 125 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 HBZP02008 142 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 FCER2P06734 321 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 PTBP1P26599 531 aaKnown RBP eCLIP7.61□□□□□ -1.19
HIF3A-219ENST00000600879 ACTBP60709 375 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 HLA-DRB3P79483 266 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 NDPQ00604 133 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF45Q02386 682 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 LSAMPQ13449 338 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 HMGN3Q15651 99 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF79Q15937 498 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 LINC00299Q6ZSB3 139 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 C5orf24Q7Z6I8 188 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 PRR18Q8N4B5 295 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 LINC00311Q8N616 119 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 GVQW1Q8N7I0 195 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 MINDY2Q8NBR6 621 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 OR52I2Q8NH67 350 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 FCAMRQ8WWV6 532 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 S100ZQ8WXG8 99 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 MS4A10Q96PG2 267 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 HIPK2Q9H2X6 1198 aa7.61□□□□□ -1.19
HIF3A-219ENST00000600879 FABP7O15540 132 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 DEDDO75618 318 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 RBBP9O75884 186 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 HLA-DRB1P01911 266 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 SCTP09683 121 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 RCVRNP35243 200 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF134P52741 427 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 ARPC4P59998 168 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 Q6ZS49 121 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 SLC25A48Q6ZT89 311 aaKnown RBP7.6□□□□□ -1.19
HIF3A-219ENST00000600879 ZNF554Q86TJ5 538 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 HOGA1Q86XE5 327 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 MFSD4AQ8N468 514 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 BEST4Q8NFU0 473 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 OR1L1Q8NH94 360 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 ABHD5Q8WTS1 349 aa7.6□□□□□ -1.19
HIF3A-219ENST00000600879 SMIM4Q8WVI0 70 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms