RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
IRF3-226ENST00000600453 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
IRF3-226ENST00000600453 SORL1Q92673 2214 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 A0A0G2JLM5 398 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 SOX15O60248 233 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
IRF3-226ENST00000600453 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 LGALS1P09382 135 aaKnown RBP12.14□□□□□ -0.47
IRF3-226ENST00000600453 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
IRF3-226ENST00000600453 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
IRF3-226ENST00000600453 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 ANXA10Q9UJ72 324 aa12.14□□□□□ -0.47
IRF3-226ENST00000600453 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
IRF3-226ENST00000600453 IGKV1D-8A0A087WSZ0 117 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 A0A087WXM4 84 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 TMEM235A6NFC5 223 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 OVOL1O14753 267 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 TRGV3P03979 118 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 HSPB1P04792 205 aaKnown RBP12.13□□□□□ -0.47
IRF3-226ENST00000600453 CRYGBP07316 175 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 TPPP2P59282 170 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 GNB1P62873 340 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 GRPEL2Q8TAA5 225 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 RHOVQ96L33 236 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 MS4A10Q96PG2 267 aa12.13□□□□□ -0.47
IRF3-226ENST00000600453 MRPS7Q9Y2R9 242 aaKnown RBP12.13□□□□□ -0.47
IRF3-226ENST00000600453 TRAV18A0A075B6X5 111 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 BRI3O95415 125 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 ECI1P42126 302 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 UBE2KP61086 200 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 CD69Q07108 199 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 POC5Q8NA72 575 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 NUDCD2Q8WVJ2 157 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 DDB2Q92466 427 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 DCUN1D4Q92564 292 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 S100A16Q96FQ6 103 aaKnown RBP12.12□□□□□ -0.47
IRF3-226ENST00000600453 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 RANGRFQ9HD47 186 aaPredicted RBP12.12□□□□□ -0.47
IRF3-226ENST00000600453 SPATA2Q9UM82 520 aa12.12□□□□□ -0.47
IRF3-226ENST00000600453 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
IRF3-226ENST00000600453 ACTL6BO94805 426 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 CRYZL1O95825 349 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
IRF3-226ENST00000600453 CBX5P45973 191 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 ARPC4P59998 168 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 PHB2Q99623 299 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 HSD17B10Q99714 261 aaKnown RBP12.11□□□□□ -0.47
IRF3-226ENST00000600453 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
IRF3-226ENST00000600453 ZNF256Q9Y2P7 627 aaPredicted RBP12.11□□□□□ -0.47
IRF3-226ENST00000600453 RBMX2Q9Y388 322 aaKnown RBP12.11□□□□□ -0.47
IRF3-226ENST00000600453 TNCP24821 2201 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 LINC00473A8K010 186 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 J3QRK9 145 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 AIREO43918 545 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 TUSC2O75896 110 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 AADACP22760 399 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 VAX1Q5SQQ9 334 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 KCTD9Q7L273 389 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 TSPAN14Q8NG11 270 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 OR5H6Q8NGV6 325 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
IRF3-226ENST00000600453 C5orf30Q96GV9 206 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 AIFM2Q9BRQ8 373 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 ELOVL1Q9BW60 279 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 RNF167Q9H6Y7 350 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 TPSG1Q9NRR2 321 aa12.1□□□□□ -0.47
IRF3-226ENST00000600453 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 SSX5O60225 188 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 FCGR3BO75015 233 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 SAP30O75446 220 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 IGHV3-11P01762 117 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 NHLRC4P0CG21 123 aaPredicted RBP12.09□□□□□ -0.47
IRF3-226ENST00000600453 ZP3P21754 424 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 CDK10Q15131 360 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 MSMO1Q15800 293 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 PRSS8Q16651 343 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 MMD2Q8IY49 270 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
IRF3-226ENST00000600453 AUNIPQ9H7T9 357 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 NDUFA13Q9P0J0 144 aa12.09□□□□□ -0.47
IRF3-226ENST00000600453 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
IRF3-226ENST00000600453 A0A087WW49 117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms