RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 TIMP3P35625 211 aa15.62■□□□□ 0.09
ARHGEF1-221ENST00000600387 RPS16P62249 146 aaKnown RBP15.62■□□□□ 0.09
ARHGEF1-221ENST00000600387 ZNF146Q15072 292 aa15.62■□□□□ 0.09
ARHGEF1-221ENST00000600387 SPEM1Q8N4L4 309 aa15.62■□□□□ 0.09
ARHGEF1-221ENST00000600387 CBY1Q9Y3M2 126 aa15.62■□□□□ 0.09
ARHGEF1-221ENST00000600387 PGPEP1LA6NFU8 196 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 MPDU1O75352 247 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 RBMXL2O75526 392 aaKnown RBP15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 CRISP2P16562 243 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 LHX2P50458 406 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 TAAR6Q96RI8 345 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 PATZ1Q9HBE1 687 aaKnown RBP15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 TP53TG3Q9ULZ0 132 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 BRS3P32247 399 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 TRIP6Q15654 476 aaKnown RBP15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 SCCPDHQ8NBX0 429 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 IFI44Q8TCB0 444 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 C5orf30Q96GV9 206 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 VAMP8Q9BV40 100 aa15.61■□□□□ 0.09
ARHGEF1-221ENST00000600387 TRBV20OR9-2A0A075B6H5 130 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 PINLYPA6NC86 204 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 C17orf98A8MV24 154 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 BMP5P22003 454 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 CYB561P49447 251 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 ZNF90Q03938 601 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 SRYQ05066 204 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 ZNF808Q8N4W9 903 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 OR5AU1Q8NGC0 362 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 APH1AQ96BI3 265 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 BOKQ9UMX3 212 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 A6NNC1 897 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 C15orf62A8K5M9 175 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 NXPH2O95156 264 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 BRWD1-AS2P59051 145 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 Q0VFX4 171 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 GCSAMLQ5JQS6 135 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 WDR31Q8NA23 367 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 HSPB9Q9BQS6 159 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 PHF7Q9BWX1 381 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 QTRT1Q9BXR0 403 aaKnown RBP15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 MRPL18Q9H0U6 180 aaKnown RBP15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 LPAR2Q9HBW0 351 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 IL36BQ9NZH7 164 aa15.6■□□□□ 0.09
ARHGEF1-221ENST00000600387 TMEM30CPA0ZSE6 113 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 SERF1AO75920 110 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 CXorf1O96002 111 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 NPSP0C0P6 89 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 OPRK1P41145 380 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 TNFSF10P50591 281 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 EDDM3BP56851 147 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 LINC00310P59036 64 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 CEP290O15078 2479 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 YLPM1P49750 1951 aaKnown RBP15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 NEURL1O76050 574 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 CCL4P13236 92 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 TDRG1Q3Y452 100 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 WDR86Q86TI4 376 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 OCC1Q8TAD7 63 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 NINJ1Q92982 152 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 HLA-CQ95604 372 aa15.59■□□□□ 0.09
ARHGEF1-221ENST00000600387 OOEPA6NGQ2 149 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 STAG3L2P0CL84 134 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 STAG3L3P0CL85 134 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 ARL14EPLP0DKL9 152 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 CD33P20138 364 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 CBLN1P23435 193 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 RPP30P78346 268 aaKnown RBP15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 Q0VG73 95 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 OR2J1Q9GZK6 312 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
ARHGEF1-221ENST00000600387 C12orf77C9JDV5 145 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 WISP2O76076 250 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 TRA2AQ13595 282 aaKnown RBP eCLIP15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 IGFBP7Q16270 282 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 SPINK9Q5DT21 86 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 PPP1R32Q7Z5V6 425 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 TMEM204Q9BSN7 226 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 SCO2A0A1W2PP80 73 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 CLDN18P56856 261 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 ARSJQ5FYB0 599 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 BAGE3Q86Y29 109 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 BAGE2Q86Y30 109 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 OR52L2PQ8NGH6 319 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 VN1R17PQ8TDU5 208 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 SAMD10Q9BYL1 202 aa15.57■□□□□ 0.08
ARHGEF1-221ENST00000600387 HAND1O96004 215 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 MT-CO3P00414 261 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 IL6RP08887 468 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 OTX2P32243 289 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 CDKN1AP38936 164 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 ZNF703Q9H7S9 590 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 TRBV9A0A0B4J1U6 114 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 A8MXE2 369 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 PDLIM3Q53GG5 364 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 SPATA46Q5T0L3 261 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 SLC35E4Q6ICL7 350 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 MCEMP1Q8IX19 187 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 HSD17B10Q99714 261 aaKnown RBP15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 LY96Q9Y6Y9 160 aa15.56■□□□□ 0.08
ARHGEF1-221ENST00000600387 CFAP54Q96N23 3096 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms