RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TCTEX1D2Q8WW35 142 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 GPHA2Q96T91 129 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 RSRP1Q9BUV0 290 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 AKIP1Q9NQ31 210 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 SIGLEC9Q9Y336 463 aa15.36■□□□□ 0.05
UPF1-209ENST00000600310 SH2D7A6NKC9 451 aaPredicted RBP15.35■□□□□ 0.05
UPF1-209ENST00000600310 BAK1Q16611 211 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 SCGB2B2Q4G0G5 96 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 TMEM177Q53S58 311 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 CMTM1Q8IZ96 169 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 SLC38A6Q8IZM9 456 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 TOMM5Q8N4H5 51 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 DEDD2Q8WXF8 326 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 TSNAXQ99598 290 aaKnown RBP15.35■□□□□ 0.05
UPF1-209ENST00000600310 RASL11BQ9BPW5 248 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 KIAA1456Q9P272 454 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 RNF114Q9Y508 228 aa15.35■□□□□ 0.05
UPF1-209ENST00000600310 RRHO14718 337 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 FCGR3BO75015 233 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 PGLYRP1O75594 196 aaPredicted RBP15.34■□□□□ 0.05
UPF1-209ENST00000600310 SPDEFO95238 335 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 KIR2DS2P43631 304 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 LGALS7P47929 136 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 PROK1P58294 105 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 BRWD1-AS2P59051 145 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 CATR1Q13166 79 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 C5orf64Q2M2E5 130 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 C12orf54Q6X4T0 127 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 PRRT1Q99946 306 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 SERTAD4Q9NUC0 356 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 SLC2A8Q9NY64 477 aa15.34■□□□□ 0.05
UPF1-209ENST00000600310 SHOXO15266 292 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 PEX14O75381 377 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 CRYZL1O95825 349 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 PGAM2P15259 253 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 FAUP35544 74 aaKnown RBP15.33■□□□□ 0.04
UPF1-209ENST00000600310 PSG5Q15238 335 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 OR2B11Q5JQS5 317 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 C9orf152Q5JTZ5 239 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 OR51S1Q8NGJ8 323 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 OSR1Q8TAX0 266 aaPredicted RBP15.33■□□□□ 0.04
UPF1-209ENST00000600310 S100ZQ8WXG8 99 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 MRGPRFQ96AM1 343 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 HARBI1Q96MB7 349 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 HRASLSQ9HDD0 168 aa15.33■□□□□ 0.04
UPF1-209ENST00000600310 SRRM4A7MD48 611 aaKnown RBP15.32■□□□□ 0.04
UPF1-209ENST00000600310 RBFOX2O43251 390 aaKnown RBP eCLIP15.32■□□□□ 0.04
UPF1-209ENST00000600310 IGLV2-23P01705 113 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 IGHG2P01859 326 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 S100GP29377 79 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 ECI1P42126 302 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 PPP5CP53041 499 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 PHLDA2Q53GA4 152 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 TRIQKQ629K1 86 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 LIN54Q6MZP7 749 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 OR13C8Q8NGS7 320 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 OR51H1Q8NH63 302 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 OR4S2Q8NH73 311 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 ZNF486Q96H40 463 aaPredicted RBP15.32■□□□□ 0.04
UPF1-209ENST00000600310 FBXL15Q9H469 300 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 MCUBQ9NWR8 336 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 SCP2D1Q9UJQ7 156 aa15.32■□□□□ 0.04
UPF1-209ENST00000600310 HLA-DRB1P01911 266 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 VDAC2P45880 294 aaPredicted RBP15.31■□□□□ 0.04
UPF1-209ENST00000600310 SURF2Q15527 256 aaPredicted RBP15.31■□□□□ 0.04
UPF1-209ENST00000600310 TMEM95Q3KNT9 176 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
UPF1-209ENST00000600310 ZNF57Q68EA5 555 aaPredicted RBP15.31■□□□□ 0.04
UPF1-209ENST00000600310 SPAG16Q8N0X2 631 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 ZFAND1Q8TCF1 268 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 CD300LFQ8TDQ1 290 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 WNT10AQ9GZT5 417 aa15.31■□□□□ 0.04
UPF1-209ENST00000600310 METTL1Q9UBP6 276 aaKnown RBP15.31■□□□□ 0.04
UPF1-209ENST00000600310 HAX1O00165 279 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 RLN1P04808 185 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 CRYGBP07316 175 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 IL7P13232 177 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 INPP1P49441 399 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 RND3P61587 244 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 IDO2Q6ZQW0 420 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 SLC35E3Q7Z769 313 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 POC5Q8NA72 575 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 MARCH1Q8TCQ1 289 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 WFDC12Q8WWY7 111 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 HSPB9Q9BQS6 159 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 SLC2A9Q9NRM0 540 aa15.3■□□□□ 0.04
UPF1-209ENST00000600310 KCNAB3O43448 404 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 SLC25A17O43808 307 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 RAMP3O60896 148 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 CTSDP07339 412 aaPredicted RBP15.29■□□□□ 0.04
UPF1-209ENST00000600310 PI3P19957 117 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 F2RP25116 425 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 UBE2KP61086 200 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 PLGLAQ15195 96 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 TBC1D26Q86UD7 250 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 TCTEX1D1Q8N7M0 179 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 C3orf56Q8N813 242 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 CCDC32Q9BV29 185 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 ZNF747Q9BV97 191 aa15.29■□□□□ 0.04
UPF1-209ENST00000600310 IGHV7-81A0A0B4J1V7 117 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms