RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 RBMXL1Q96E39 390 aaKnown RBP8.9□□□□□ -0.98
HIF3A-217ENST00000600236 RITA1Q96K30 269 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 OR5B12Q96R08 314 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 ABHD1Q96SE0 405 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 RNF5Q99942 180 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 C11orf54Q9H0W9 315 aaPredicted RBP8.9□□□□□ -0.98
HIF3A-217ENST00000600236 KLK15Q9H2R5 256 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 FBXL15Q9H469 300 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 C12orf4Q9NQ89 552 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 RHBDL2Q9NX52 303 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 FOXA2Q9Y261 457 aaPredicted RBP8.9□□□□□ -0.98
HIF3A-217ENST00000600236 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
HIF3A-217ENST00000600236 U3KQK5 164 aa8.9□□□□□ -0.98
HIF3A-217ENST00000600236 LINC01619G3V211 115 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 H0YJW9 148 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 OVOL1O14753 267 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 LDLRAD4O15165 306 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 PFDN1O60925 122 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 CT45A6P0DMU7 189 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 CT45A5P0DMU8 189 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 CT45A7P0DMV0 189 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 CEACAM6P40199 344 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 CRIP2P52943 208 aaPredicted RBP8.89□□□□□ -0.99
HIF3A-217ENST00000600236 RPL39P5Q59GN2 51 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 C5orf24Q7Z6I8 188 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 NRARPQ7Z6K4 114 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 PTX4Q96A99 478 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 ABHD14BQ96IU4 210 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 LPAR5Q9H1C0 372 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 KCNK15Q9H427 330 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 AK3Q9UIJ7 227 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF221Q9UK13 617 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 HSF4Q9ULV5 492 aa8.89□□□□□ -0.99
HIF3A-217ENST00000600236 A0A0A6YYH2 397 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 A6NJ64 397 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 SAP30O75446 220 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 SPDEFO95238 335 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 APOA2P02652 100 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 LGALS1P09382 135 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 CLDN12P56749 244 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 GNB1P62873 340 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 CX3CL1P78423 397 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 QRFPP83859 136 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 KIAA0141Q14154 515 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 GLDNQ6ZMI3 551 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 CADM3Q8N126 398 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 DUSP18Q8NEJ0 188 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 OR56B1Q8NGI3 324 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 FAM3DQ96BQ1 224 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 FLYWCH2Q96CP2 140 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 S100A16Q96FQ6 103 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 CYYR1Q96J86 154 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 CMSS1Q9BQ75 279 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 C7orf50Q9BRJ6 194 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 THAP7Q9BT49 309 aaPredicted RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 SLA2Q9H6Q3 261 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 METTL1Q9UBP6 276 aaKnown RBP8.88□□□□□ -0.99
HIF3A-217ENST00000600236 SMAD5-AS1Q9Y6J3 95 aa8.88□□□□□ -0.99
HIF3A-217ENST00000600236 A0A0A6YYD4 124 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 GABARAPH6UMI1 98 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 ARPC1BO15143 372 aaKnown RBP8.87□□□□□ -0.99
HIF3A-217ENST00000600236 SOCS1O15524 211 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 LYRM1O43325 122 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 XRCC3O43542 346 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 OR8U9P0C7N5 309 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 RAB6AP20340 208 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 VEGFCP49767 419 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 NDPQ00604 133 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 DYRK1AQ13627 763 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 ACTBL2Q562R1 376 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 ASPHD1Q5U4P2 390 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 UNQ5815/PRO19632Q6UWF5 114 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 PPP1R27Q86WC6 154 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 PDPNQ86YL7 162 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 FAM89BQ8N5H3 189 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 DEDD2Q8WXF8 326 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 DCUN1D4Q92564 292 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 NEURL2Q9BR09 285 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 AGMATQ9BSE5 352 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 TOLLIPQ9H0E2 274 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 Q9N2K0 584 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 OR1A1Q9P1Q5 309 aa8.87□□□□□ -0.99
HIF3A-217ENST00000600236 RBMX2Q9Y388 322 aaKnown RBP8.87□□□□□ -0.99
HIF3A-217ENST00000600236 CA2P00918 260 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 SCTP09683 121 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 INPP1P49441 399 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 TPPP2P59282 170 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 TAS2R20P59543 309 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 RPS16P62249 146 aaKnown RBP8.86□□□□□ -0.99
HIF3A-217ENST00000600236 CBX3Q13185 183 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 KLF9Q13886 244 aaPredicted RBP8.86□□□□□ -0.99
HIF3A-217ENST00000600236 C19orf54Q5BKX5 351 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 TMEM69Q5SWH9 247 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF562Q6V9R5 426 aa8.86□□□□□ -0.99
HIF3A-217ENST00000600236 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.86□□□□□ -0.99
HIF3A-217ENST00000600236 ENKURQ8TC29 256 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms