RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 LINC00527Q9UJ94 153 aa13.81□□□□□ -0.2
USHBP1-209ENST00000598570 ZNF701M0R085 212 aaPredicted RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 CTDSP2O14595 271 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 BRI3O95415 125 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 CDX1P47902 265 aaPredicted RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 RPS16P62249 146 aaKnown RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 RPL23AP62750 156 aaKnown RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 AKIRIN2Q53H80 203 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 TEX45Q8NA69 505 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 METTL1Q9UBP6 276 aaKnown RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
USHBP1-209ENST00000598570 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
USHBP1-209ENST00000598570 MEIS3P1A6NDR6 274 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 ATP6V0E1O15342 81 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 GNRHRP30968 328 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 RFX2P48378 723 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 UBE2KP61086 200 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 VAX1Q5SQQ9 334 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 MFSD4AQ8N468 514 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 MOB3AQ96BX8 217 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 RABL2AQ9UBK7 228 aaPredicted RBP13.79□□□□□ -0.2
USHBP1-209ENST00000598570 RABL2BQ9UNT1 228 aa13.79□□□□□ -0.2
USHBP1-209ENST00000598570 ARPC1BO15143 372 aaKnown RBP13.78□□□□□ -0.2
USHBP1-209ENST00000598570 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.2
USHBP1-209ENST00000598570 RCVRNP35243 200 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 NSUN5P1Q3KNT7 163 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 KPRPQ5T749 579 aaPredicted RBP13.78□□□□□ -0.2
USHBP1-209ENST00000598570 CADM3Q8N126 398 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 CCL28Q9NRJ3 127 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 MTFP1Q9UDX5 166 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 MRPS7Q9Y2R9 242 aaKnown RBP13.78□□□□□ -0.2
USHBP1-209ENST00000598570 PRELID3BQ9Y3B1 194 aa13.78□□□□□ -0.2
USHBP1-209ENST00000598570 TRAV41A0A0B4J266 112 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 G3V318 75 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 CTDSPLO15194 276 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 SLC25A17O43808 307 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 IL6RP08887 468 aaPredicted RBP13.77□□□□□ -0.21
USHBP1-209ENST00000598570 SSBP1Q04837 148 aaKnown RBP13.77□□□□□ -0.21
USHBP1-209ENST00000598570 ETV3LQ6ZN32 361 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 FAM110DQ8TAY7 271 aaPredicted RBP13.77□□□□□ -0.21
USHBP1-209ENST00000598570 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 TPSG1Q9NRR2 321 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 A3GALT2U3KPV4 340 aa13.77□□□□□ -0.21
USHBP1-209ENST00000598570 SOX15O60248 233 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 RPLP1P05386 114 aaKnown RBP13.76□□□□□ -0.21
USHBP1-209ENST00000598570 TBPP20226 339 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 VDAC1P21796 283 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 HRH1P35367 487 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 UCP3P55916 312 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 MRPS10P82664 201 aaKnown RBP13.76□□□□□ -0.21
USHBP1-209ENST00000598570 RUNX1Q01196 453 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 PJVKQ0ZLH3 352 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 KCTD9Q7L273 389 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 LAX1Q8IWV1 398 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 OR5H2Q8NGV7 314 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 HARBI1Q96MB7 349 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 TMEM68Q96MH6 324 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 P2RX4Q99571 388 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 SLC5A7Q9GZV3 580 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 EHFQ9NZC4 300 aa13.76□□□□□ -0.21
USHBP1-209ENST00000598570 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 GABARAPH6UMI1 98 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 J3QRK9 145 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 SHOXO15266 292 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 CRYZL1O95825 349 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 CA2P00918 260 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 PMP2P02689 132 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 CD74P04233 296 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 FGF2P09038 288 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 KIR2DS2P43631 304 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 TMEM267Q0VDI3 215 aaPredicted RBP13.75□□□□□ -0.21
USHBP1-209ENST00000598570 CBX3Q13185 183 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 POU2AF1Q16633 256 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 PRSS8Q16651 343 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 ZNF818PQ6ZRF7 136 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 ZNF695Q8IW36 515 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
USHBP1-209ENST00000598570 OR6F1Q8NGZ6 308 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 OR52I2Q8NH67 350 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 SECTM1Q8WVN6 248 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 KLK15Q9H2R5 256 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 KLK11Q9UBX7 282 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 WSB1Q9Y6I7 421 aa13.75□□□□□ -0.21
USHBP1-209ENST00000598570 FCGR3BO75015 233 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 FCER2P06734 321 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 HLA-DMAP28067 261 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 MYCNOSP40205 109 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 FXYD3Q14802 87 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 ACTBL2Q562R1 376 aa13.74□□□□□ -0.21
USHBP1-209ENST00000598570 CXorf66Q5JRM2 361 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms