RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ITGB1BP1O14713 200 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 NBR2O15453 112 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 SCGNO76038 276 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
LIG1-214ENST00000597146 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
LIG1-214ENST00000597146 SDC2P34741 201 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 CHRNA7P36544 502 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 NDPQ00604 133 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 IDNKQ5T6J7 187 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FAM131AQ6UXB0 335 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 ODF3L1Q8IXM7 274 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
LIG1-214ENST00000597146 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FBXO7Q9Y3I1 522 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FAT2Q9NYQ8 4349 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 A0A087WXM4 84 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 GSTT2P0CG29 244 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 GSTT2BP0CG30 244 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
LIG1-214ENST00000597146 CBX3Q13185 183 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 GLDNQ6ZMI3 551 aaPredicted RBP11.75□□□□□ -0.53
LIG1-214ENST00000597146 DRAXINQ8NBI3 349 aaPredicted RBP11.75□□□□□ -0.53
LIG1-214ENST00000597146 MAFIPQ8WZ33 124 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 IFI27L2Q9H2X8 130 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
LIG1-214ENST00000597146 WASHC3Q9Y3C0 194 aa11.75□□□□□ -0.53
LIG1-214ENST00000597146 NUPR2A6NF83 97 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 M0R1X1 148 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 RAB27BO00194 218 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 RBBP9O75884 186 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 APOA2P02652 100 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 TFAP2AP05549 437 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 FCGR3AP08637 254 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 GNG2P59768 71 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 RITA1Q96K30 269 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
LIG1-214ENST00000597146 WFDC10AQ9H1F0 79 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 DNAH2Q9P225 4427 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
LIG1-214ENST00000597146 H0Y980 276 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 TNFAIP8O95379 198 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 EWSR1Q01844 656 aaKnown RBP eCLIP11.73□□□□□ -0.53
LIG1-214ENST00000597146 C5orf64Q2M2E5 130 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 IGSF11Q5DX21 431 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 SFXN4Q6P4A7 337 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 TSNAXQ99598 290 aaKnown RBP11.73□□□□□ -0.53
LIG1-214ENST00000597146 DIABLOQ9NR28 239 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
LIG1-214ENST00000597146 A3GALT2U3KPV4 340 aa11.73□□□□□ -0.53
LIG1-214ENST00000597146 J3QRK9 145 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 MFNGO00587 321 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 CLEC2LP0C7M8 214 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 CD40LGP29965 261 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 CD81P60033 236 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 TMEM267Q0VDI3 215 aaPredicted RBP11.72□□□□□ -0.53
LIG1-214ENST00000597146 LCN12Q6JVE5 192 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 NPBQ8NG41 125 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 RNF5Q99942 180 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 AGMATQ9BSE5 352 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 FBXL15Q9H469 300 aa11.72□□□□□ -0.53
LIG1-214ENST00000597146 TRAV18A0A075B6X5 111 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 H0YJW9 148 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 RRHO14718 337 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 AIREO43918 545 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 HACD4Q5VWC8 232 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.53
LIG1-214ENST00000597146 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
LIG1-214ENST00000597146 CROCCP3Q8IVE0 287 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 DEFB125Q8N687 156 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
LIG1-214ENST00000597146 LGALS14Q8TCE9 139 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 OR2D2Q9H210 308 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 RNF167Q9H6Y7 350 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 SLC35D1Q9NTN3 355 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 RHBDL2Q9NX52 303 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.53
LIG1-214ENST00000597146 ETV7Q9Y603 341 aa11.71□□□□□ -0.53
LIG1-214ENST00000597146 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 CNIH1O95406 144 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 DTYMKP23919 212 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 TPPP2P59282 170 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms