RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ARPC1AQ92747 370 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SLC25A38Q96DW6 304 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 FAM103A1Q9BTL3 118 aaKnown RBP8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 DIABLOQ9NR28 239 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 TPSG1Q9NRR2 321 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SCOCQ9UIL1 159 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 ANXA10Q9UJ72 324 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SPATA2Q9UM82 520 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 A3GALT2U3KPV4 340 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 LINC00473A8K010 186 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 SEC14L6B5MCN3 397 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 ARPC1BO15143 372 aaKnown RBP8.15□□□□□ -1.1
CCDC9-203ENST00000596938 SHOXO15266 292 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 TNFAIP8O95379 198 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 CNIH1O95406 144 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 BRI3O95415 125 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 NFYAP23511 347 aaPredicted RBP8.15□□□□□ -1.1
CCDC9-203ENST00000596938 INSL3P51460 131 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 UBE2KP61086 200 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 GNB1P62873 340 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
CCDC9-203ENST00000596938 PJVKQ0ZLH3 352 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 DCTN2Q13561 401 aaKnown RBP8.15□□□□□ -1.1
CCDC9-203ENST00000596938 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 ASPHD1Q5U4P2 390 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 ZNF645Q8N7E2 425 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 OSR1Q8TAX0 266 aaPredicted RBP8.15□□□□□ -1.1
CCDC9-203ENST00000596938 YIPF6Q96EC8 236 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 RHOVQ96L33 236 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 OR5B12Q96R08 314 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 VCX3AQ9NNX9 186 aa8.15□□□□□ -1.1
CCDC9-203ENST00000596938 H3BUA1 57 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 AIREO43918 545 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 TUSC2O75896 110 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 IGLV2-14P01704 120 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 HSPB1P04792 205 aaKnown RBP8.14□□□□□ -1.11
CCDC9-203ENST00000596938 LGALS1P09382 135 aaKnown RBP8.14□□□□□ -1.11
CCDC9-203ENST00000596938 MRGPRG-AS1Q2M3A8 158 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 VMA21Q3ZAQ7 101 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 HOGA1Q86XE5 327 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 GRPEL2Q8TAA5 225 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 MS4A10Q96PG2 267 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 AUNIPQ9H7T9 357 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 RBMX2Q9Y388 322 aaKnown RBP8.14□□□□□ -1.11
CCDC9-203ENST00000596938 PRELID3BQ9Y3B1 194 aa8.14□□□□□ -1.11
CCDC9-203ENST00000596938 A0A0G2JLM5 398 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 TRIM64CA6NLI5 447 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 LINC01619G3V211 115 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 J3QRK9 145 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 CRYZL1O95825 349 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 AADACP22760 399 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 RPS19P39019 145 aaKnown RBP8.13□□□□□ -1.11
CCDC9-203ENST00000596938 CBX5P45973 191 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 MSMO1Q15800 293 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 PRSS8Q16651 343 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 OVCH2Q7RTZ1 564 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 POC5Q8NA72 575 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 BEST4Q8NFU0 473 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 CASTOR1Q8WTX7 329 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 DCUN1D4Q92564 292 aa8.13□□□□□ -1.11
CCDC9-203ENST00000596938 S100A16Q96FQ6 103 aaKnown RBP8.13□□□□□ -1.11
CCDC9-203ENST00000596938 HSD17B10Q99714 261 aaKnown RBP8.13□□□□□ -1.11
CCDC9-203ENST00000596938 ALX4Q9H161 411 aaPredicted RBP8.13□□□□□ -1.11
CCDC9-203ENST00000596938 IGKV1D-13A0A0B4J2D9 117 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 MSGN1A6NI15 193 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 OVOL1O14753 267 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 XRCC3O43542 346 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 TRGV3P03979 118 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 IGKV1-13P0DP09 117 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 TPPP2P59282 170 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 ARPC4P59998 168 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 RPL30P62888 115 aaKnown RBP8.12□□□□□ -1.11
CCDC9-203ENST00000596938 EIF4EBP1Q13541 118 aaPredicted RBP8.12□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF66Q6ZN08 573 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 ZNF429Q86V71 674 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 MFSD4AQ8N468 514 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 GVQW1Q8N7I0 195 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 OR5T1Q8NG75 326 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 GIMAP1Q8WWP7 306 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 DLX4Q92988 240 aaPredicted RBP8.12□□□□□ -1.11
CCDC9-203ENST00000596938 DCUN1D5Q9BTE7 237 aa8.12□□□□□ -1.11
CCDC9-203ENST00000596938 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
CCDC9-203ENST00000596938 IGHV4OR15-8A0A075B7B6 117 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 A0A087WW49 117 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 CREBL2O60519 120 aaPredicted RBP8.11□□□□□ -1.11
CCDC9-203ENST00000596938 FCGR3BO75015 233 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 FCGR2CP31995 323 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 TGFBR1P36897 503 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 ECI1P42126 302 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 BRWD1-AS2P59051 145 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 CDK10Q15131 360 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 KCTD9Q7L273 389 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 ZBTB34Q8NCN2 500 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 OR5AP2Q8NGF4 316 aa8.11□□□□□ -1.11
CCDC9-203ENST00000596938 KCTD12Q96CX2 325 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms