RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FYTTD1Q96QD9 318 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-211ENST00000595945 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
SHKBP1-211ENST00000595945 TMED3Q9Y3Q3 217 aa11.92□□□□□ -0.5
SHKBP1-211ENST00000595945 NAV3Q8IVL0 2385 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 A0A1W2PPI3 338 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 HPRT1P00492 218 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 RRASP10301 218 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 VDAC1P21796 283 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 REG1BP48304 166 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 MIDNQ504T8 468 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 DHRS7BQ6IAN0 325 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 PDZD9Q8IXQ8 264 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 OR4S2Q8NH73 311 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 LSM10Q969L4 123 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 RPEQ96AT9 228 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 COMMD9Q9P000 198 aa11.91□□□□□ -0.5
SHKBP1-211ENST00000595945 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 A0A1W2PRD5 423 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 A0A1W2PRF3 423 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 A0A1W2PRM7 423 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 MPTX1A8MV57 137 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 TGFAP01135 160 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 AVPP01185 164 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 IFNA21P01568 189 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 CEACAM3P40198 252 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 RAP2BP61225 183 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 TMEM177Q53S58 311 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 GSG1LQ6UXU4 331 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 C2orf50Q96LR7 162 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 CSMD1Q96PZ7 3565 aa11.9□□□□□ -0.5
SHKBP1-211ENST00000595945 IGHV1-69DA0A0B4J2H0 117 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 C13orf42A0A1B0GVH6 325 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 C5orf51A6NDU8 294 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 G3V3Q6 166 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 NPFFO15130 113 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 ATG12O94817 140 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 IGHV1-69P01742 117 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 APOA2P02652 100 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 SLC25A6P12236 298 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 EPHA1P21709 976 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 MC5RP33032 325 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 POU2AF1Q16633 256 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 ZBTB8BQ8NAP8 495 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 C17orf50Q8WW18 174 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 CFHR4Q92496 578 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 NMES1Q9C002 83 aa11.89□□□□□ -0.51
SHKBP1-211ENST00000595945 AKAP9Q99996 3911 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 CRYZL1O95825 349 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 FSHBP01225 129 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 SAA4P35542 130 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 LGALS4P56470 323 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 IAH1Q2TAA2 248 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 KLF17Q5JT82 389 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 R3HDM4Q96D70 268 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 MALSU1Q96EH3 234 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 WASHC3Q9Y3C0 194 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
SHKBP1-211ENST00000595945 A0A1B0GU03 582 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 MARCH11A6NNE9 402 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 PITX3O75364 302 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 NQO2P16083 231 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 CD1BP29016 333 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 G6PCP35575 357 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 RAB13P51153 203 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 CYCSP99999 105 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 Q6ZRM9 215 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 MOB3BQ86TA1 216 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 OR4D5Q8NGN0 318 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 SPIN2AQ99865 258 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 SPIN2BQ9BPZ2 258 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 PDCD10Q9BUL8 212 aa11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 RANBP3Q9H6Z4 567 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-211ENST00000595945 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms