RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CNIH1O95406 144 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 FXYD3Q14802 87 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 MSMO1Q15800 293 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 DEFB136Q30KP8 78 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 HOGA1Q86XE5 327 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 HSD17B10Q99714 261 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 A3GALT2U3KPV4 340 aa13.82□□□□□ -0.2
SHKBP1-204ENST00000594862 XRCC3O43542 346 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 IGLV2-23P01705 113 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 NFYAP23511 347 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 LINC00205P59089 165 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 UBE2KP61086 200 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 ZNF616Q08AN1 781 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 C9orf66Q5T8R8 295 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 KCTD9Q7L273 389 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 OVCH2Q7RTZ1 564 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 TEX45Q8NA69 505 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 OR11H1Q8NG94 326 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 C5orf30Q96GV9 206 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 DUX3Q96PT4 197 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 KLK15Q9H2R5 256 aa13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 RBMX2Q9Y388 322 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-204ENST00000594862 I3L521 148 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 ARPC1BO15143 372 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 TUSC2O75896 110 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 CRYZL1O95825 349 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 PRB2P02812 416 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 RPS19P39019 145 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 TMEM69Q5SWH9 247 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 LFNGQ8NES3 379 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 GRPEL2Q8TAA5 225 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 BORCS5Q969J3 196 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 SLC25A46Q96AG3 418 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 GNB4Q9HAV0 340 aa13.8□□□□□ -0.2
SHKBP1-204ENST00000594862 SOX15O60248 233 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 RAMP3O60896 148 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 CRYGBP07316 175 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 LGALS1P09382 135 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 LSM3P62310 102 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 GNB1P62873 340 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 KIAA0141Q14154 515 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 ZNF66Q6ZN08 573 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 SAMD12Q8N8I0 201 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 CMTM3Q96MX0 182 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 FUNDC2Q9BWH2 189 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 TPSG1Q9NRR2 321 aa13.79□□□□□ -0.2
SHKBP1-204ENST00000594862 LINC00473A8K010 186 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 BRI3O95415 125 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 KIR2DS2P43631 304 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 INSL3P51460 131 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 TPPP2P59282 170 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 DGCR2P98153 550 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 POC5Q8NA72 575 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 ZBTB34Q8NCN2 500 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 OR13F1Q8NGS4 319 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 VSTM2AQ8TAG5 236 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 ACOT12Q8WYK0 555 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 DCUN1D5Q9BTE7 237 aa13.78□□□□□ -0.2
SHKBP1-204ENST00000594862 A0A0G2JLM5 398 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 SEC14L6B5MCN3 397 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 FCGR3BO75015 233 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 ACTL6BO94805 426 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 AADACP22760 399 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 FCGR2CP31995 323 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 TGFBR1P36897 503 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 CDK10Q15131 360 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 GVQW1Q8N7I0 195 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 OR5AP2Q8NGF4 316 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 TCTEX1D2Q8WW35 142 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 AIFM2Q9BRQ8 373 aa13.77□□□□□ -0.21
SHKBP1-204ENST00000594862 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 SMIM31A0A1B0GVY4 71 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 LINC01619G3V211 115 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 J3QRK9 145 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 PPYP01298 95 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 APOA1P02647 267 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 TRGV3P03979 118 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 TAS2R46P59540 309 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 TAS2R20P59543 309 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 PRSS8Q16651 343 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 PHB2Q99623 299 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
SHKBP1-204ENST00000594862 SRRM4A7MD48 611 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 HRASP01112 189 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 IGLV2-14P01704 120 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 KRTAP10-11P60412 298 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 HERV-K104P61576 105 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 NCS1P62166 190 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 CATR1Q13166 79 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 SECTM1Q8WVN6 248 aa13.75□□□□□ -0.21
SHKBP1-204ENST00000594862 GIMAP1Q8WWP7 306 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms