RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SULT1A2P50226 295 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 SRSF3P84103 164 aaKnown RBP10.85□□□□□ -0.67
VRK3-205ENST00000593919 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 TMEM231Q9H6L2 316 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 PSG11Q9UQ72 335 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 SVEP1Q4LDE5 3571 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 FAM24AA6NFZ4 105 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 VDAC1P21796 283 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ZNF134P52741 427 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ATP5J2P56134 94 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
VRK3-205ENST00000593919 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ATRAIDQ6UW56 229 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 HEPN1Q6WQI6 88 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 UBAC2Q8NBM4 344 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 SAT2Q96F10 170 aaPredicted RBP10.85□□□□□ -0.67
VRK3-205ENST00000593919 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 ABHD14BQ96IU4 210 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 SMIM8Q96KF7 97 aa10.85□□□□□ -0.67
VRK3-205ENST00000593919 RPUSD1Q9UJJ7 312 aaKnown RBP10.85□□□□□ -0.67
VRK3-205ENST00000593919 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 CSMD1Q96PZ7 3565 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 SERPINE2P07093 398 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 PVALBP20472 110 aaPredicted RBP10.84□□□□□ -0.67
VRK3-205ENST00000593919 CAV2P51636 162 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 DLX6P56179 175 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 GNB2P62879 340 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 VAMP2P63027 116 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 EWSR1Q01844 656 aaKnown RBP eCLIP10.84□□□□□ -0.67
VRK3-205ENST00000593919 TMEM30BQ3MIR4 351 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 IL22RA2Q969J5 263 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 AKR1E2Q96JD6 320 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 NAV2Q8IVL1 2488 aa10.84□□□□□ -0.67
VRK3-205ENST00000593919 A0A0G2JRQ6 117 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 SLC31A2O15432 143 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 PDLIM4P50479 330 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 IL34Q6ZMJ4 242 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 Q6ZRG5 221 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 OR10A7Q8NGE5 316 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 RNASE11Q8TAA1 199 aaKnown RBP10.83□□□□□ -0.68
VRK3-205ENST00000593919 PSMG3-AS1Q96PY0 264 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 AIFM2Q9BRQ8 373 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 ABHD14AQ9BUJ0 271 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 SSBP3Q9BWW4 388 aaPredicted RBP10.83□□□□□ -0.68
VRK3-205ENST00000593919 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 NUDT19A8MXV4 375 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 C22orf46C9J442 243 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 BLOC1S1P78537 153 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 ZNF439Q8NDP4 499 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 C8orf46Q8TAG6 207 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 PERPQ96FX8 193 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 ARV1Q9H2C2 271 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
VRK3-205ENST00000593919 PPIAL4CA0A0B4J2A2 164 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 WRBO00258 174 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 TSPAN4O14817 238 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 AGPAT2O15120 278 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 NUPL2O15504 423 aaKnown RBP10.82□□□□□ -0.68
VRK3-205ENST00000593919 IGHV2-5P01817 119 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 PPIAL4GP0DN37 164 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 GNG10P50151 68 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 KRTAP10-9P60411 292 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 CLINT1Q14677 625 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 IZUMO4Q1ZYL8 232 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 CT45A1Q5HYN5 189 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 BTNL3Q6UXE8 466 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 C11orf42Q8N5U0 333 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 CT45A3Q8NHU0 189 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 FAM216AQ8WUB2 273 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 FAM168AQ92567 244 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 GINS3Q9BRX5 216 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 FAM96BQ9Y3D0 163 aa10.82□□□□□ -0.68
VRK3-205ENST00000593919 ADCYAP1P18509 176 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 GPR12P47775 334 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 RAB7AP51149 207 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 EIF4EBP1Q13541 118 aaPredicted RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 MSMO1Q15800 293 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 Q3ZCU0 254 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 FAM122CQ6P4D5 195 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 ZBTB34Q8NCN2 500 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 PARP11Q9NR21 331 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
VRK3-205ENST00000593919 C17orf98A8MV24 154 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 F8W036 122 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 CHST1O43916 411 aa10.81□□□□□ -0.68
VRK3-205ENST00000593919 PROP1O75360 226 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms