RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 FCN1O00602 326 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
PNKP-202ENST00000593706 RBBP9O75884 186 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 TRGV3P03979 118 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 TFAP2AP05549 437 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 CLEC2LP0C7M8 214 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 SNRPBP14678 240 aaKnown RBP11.32□□□□□ -0.6
PNKP-202ENST00000593706 SERPINB10P48595 397 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 LGALS14Q8TCE9 139 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 MAFIPQ8WZ33 124 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 ZNF355PQ9NSJ1 428 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 NUBP2Q9Y5Y2 271 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 CA2P00918 260 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 GSTT2P0CG29 244 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 GSTT2BP0CG30 244 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
PNKP-202ENST00000593706 CD36P16671 472 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 DTYMKP23919 212 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 LINC00205P59089 165 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.31□□□□□ -0.6
PNKP-202ENST00000593706 GRPEL2Q8TAA5 225 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
PNKP-202ENST00000593706 A0A075B6Q4 140 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 C13orf42A0A1B0GVH6 325 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 IGKV1-16P04430 117 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 SCAND1P57086 179 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 HACD4Q5VWC8 232 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
PNKP-202ENST00000593706 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
PNKP-202ENST00000593706 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
PNKP-202ENST00000593706 LOC100506127A0A0U1RQW1 187 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 BET1O15155 118 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 SSX5O60225 188 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 SPDEFO95238 335 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 APOA2P02652 100 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 ZP3P21754 424 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 MRPS15P82914 257 aaKnown RBP11.29□□□□□ -0.6
PNKP-202ENST00000593706 MXD1Q05195 221 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 ARL6IP1Q15041 203 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 PSG5Q15238 335 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
PNKP-202ENST00000593706 Q8N1Y9 231 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 POC5Q8NA72 575 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 YIPF6Q96EC8 236 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 RHOVQ96L33 236 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 RNF5Q99942 180 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 EDA2RQ9HAV5 297 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
PNKP-202ENST00000593706 RHBDL2Q9NX52 303 aa11.29□□□□□ -0.6
PNKP-202ENST00000593706 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 TMEM235A6NFC5 223 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 SLC25A17O43808 307 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 SCGNO76038 276 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 CNIH1O95406 144 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 RPS16P62249 146 aaKnown RBP11.28□□□□□ -0.6
PNKP-202ENST00000593706 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 FXYD3Q14802 87 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 OR10J5Q8NHC4 309 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 SDHAF2Q9NX18 166 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 ZNF221Q9UK13 617 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
PNKP-202ENST00000593706 A8MZ25 164 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 M0R1X1 148 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 TGFBR1P36897 503 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
PNKP-202ENST00000593706 PDPNQ86YL7 162 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 DCSTAMPQ9H295 470 aa11.27□□□□□ -0.61
PNKP-202ENST00000593706 A0A087WXM4 84 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 H0Y980 276 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 H3BUA1 57 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 IFNA6P05013 189 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 TALDO1P37837 337 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 OR9G4Q8NGQ1 327 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 DDB2Q92466 427 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
PNKP-202ENST00000593706 A0A0A6YYH2 397 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 A6NJ64 397 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 TMEM127O75204 238 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
PNKP-202ENST00000593706 CRYGBP07316 175 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms