RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	ERVFRD-1	P60508	538 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	TNFRSF9	Q07011	255 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	C11orf42	Q8N5U0	333 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	TMEM252	Q8N6L7	170 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	ZNF383	Q8NA42	475 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	IGFBPL1	Q8WX77	278 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	SLC35D1	Q9NTN3	355 aa		13.72	□□□□□ -0.21
TRMT1-223	ENST00000593257	ABCA4	P78363	2273 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	LOC105371242	A0A075B767	164 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	FAM24A	A6NFZ4	105 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257		M0R1W7	72 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	NXPH3	O95157	252 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	RNF224	P0DH78	156 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	CT45A6	P0DMU7	189 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	CT45A5	P0DMU8	189 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	CT45A7	P0DMV0	189 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	PDLIM4	P50479	330 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	POU2AF1	Q16633	256 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	LRRC20	Q8TCA0	184 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	CIB3	Q96Q77	187 aa	Predicted RBP	13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	CCL19	Q99731	98 aa		13.71	□□□□□ -0.21
TRMT1-223	ENST00000593257	SPTBN1	Q01082	2364 aa	Known RBP	13.71	□□□□□ -0.22
TRMT1-223	ENST00000593257	IGSF23	A1L1A6	192 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	RBMXL2	O75526	392 aa	Known RBP	13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	CRYZL1	O95825	349 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	PAX9	P55771	341 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	UBE2K	P61086	200 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	AARD	Q4LEZ3	155 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	STX12	Q86Y82	276 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	UBAC2	Q8NBM4	344 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR4A16	Q8NH70	328 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	PCGF1	Q9BSM1	259 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	CLEC7A	Q9BXN2	247 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	BARX1	Q9HBU1	254 aa	Predicted RBP	13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	PSENEN	Q9NZ42	101 aa		13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.7	□□□□□ -0.22
TRMT1-223	ENST00000593257	ADGRG4	Q8IZF6	3080 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	IGHV2-26	A0A0B4J1V2	119 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	TXNL1	O43396	289 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	NDUFS7	O75251	213 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	SCAF4	O95104	1147 aa	Known RBP	13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	TMEM50A	O95807	157 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	COX6B1	P14854	86 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	S100A1	P23297	94 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	ZNF266	Q14584	549 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	RPL7L1	Q6DKI1	246 aa	Known RBP	13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	PDZD9	Q8IXQ8	264 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	KIR3DL3	Q8N743	410 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	BEND2	Q8NDZ0	799 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR52E5	Q8NH55	327 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	ST6GALNAC6	Q969X2	333 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	MRPL20	Q9BYC9	149 aa	Known RBP	13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	SMIM3	Q9BZL3	60 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	RBKS	Q9H477	322 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	TMEM140	Q9NV12	185 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	ONECUT1	Q9UBC0	465 aa		13.69	□□□□□ -0.22
TRMT1-223	ENST00000593257	CHD6	Q8TD26	2715 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	C22orf46	C9J442	243 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	SULT1A1	P50225	295 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	RAB13	P51153	203 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	NHLH2	Q02577	135 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	C1orf122	Q6ZSJ8	110 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	PDPN	Q86YL7	162 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR5AN1	Q8NGI8	311 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR1S2	Q8NGQ3	325 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR13D1	Q8NGV5	346 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	OSR1	Q8TAX0	266 aa	Predicted RBP	13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	CLCC1	Q96S66	551 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	ARV1	Q9H2C2	271 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257	ZNRD1	Q9P1U0	126 aa		13.68	□□□□□ -0.22
TRMT1-223	ENST00000593257		H0YJW9	148 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	ENSA	O43768	121 aa	Known RBP	13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	DFFB	O76075	338 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	IGHV2-5	P01817	119 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	NMB	P08949	121 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	OR9G9	P0C7N8	305 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	IAPP	P10997	89 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	MC5R	P33032	325 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	SPCS3	P61009	180 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	HLA-DRB5	Q30154	266 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	ZNF429	Q86V71	674 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	TGIF2LX	Q8IUE1	241 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	RHOV	Q96L33	236 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	NABP2	Q9BQ15	211 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	NARFL	Q9H6Q4	476 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	MED9	Q9NWA0	146 aa		13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	YLPM1	P49750	1951 aa	Known RBP	13.67	□□□□□ -0.22
TRMT1-223	ENST00000593257	CEBPZOS	A8MTT3	80 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	IGLV1-47	P01700	117 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	IGHV4-39	P01824	125 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	HBG1	P69891	147 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	HBG2	P69892	147 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	TMEM177	Q53S58	311 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	SSX9	Q7RTT3	188 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	ZNF295-AS1	Q8N0V1	137 aa		13.66	□□□□□ -0.22
TRMT1-223	ENST00000593257	STPG2	Q8N412	459 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms