RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SMIM21Q3B7S5 101 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 SPANXN5Q5MJ07 72 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 SLC35E4Q6ICL7 350 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 GFRALQ6UXV0 394 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-229ENST00000592771 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 ELOVL5Q9NYP7 299 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
RANBP3-229ENST00000592771 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 IFITM10A6NMD0 228 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 SOX15O60248 233 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 ZNF737O75373 536 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 P0C879 139 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 KLF3P57682 345 aaPredicted RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 PAX5Q02548 391 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 C22orf34Q6ZV56 151 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 ZCCHC14Q8WYQ9 949 aaKnown RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 VSIRQ9H7M9 311 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.51
RANBP3-229ENST00000592771 UFSP2Q9NUQ7 469 aa11.9□□□□□ -0.51
RANBP3-229ENST00000592771 CACNA1AO00555 2505 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 CTXND1A0A1B0GTU2 59 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 OOEPA6NGQ2 149 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 CEBPZOSA8MTT3 80 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 TRGC2P03986 189 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-229ENST00000592771 OR3A1P47881 315 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 HOXA4Q00056 320 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-229ENST00000592771 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 CYP2G1PQ6ZSU1 146 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 LHX4Q969G2 390 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 GALMQ96C23 342 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 TMEM147Q9BVK8 224 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 RBKSQ9H477 322 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 DUSP13Q9UII6 198 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 PLCE1Q9P212 2302 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 IGF2RP11717 2491 aa11.89□□□□□ -0.51
RANBP3-229ENST00000592771 CD40P25942 277 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
RANBP3-229ENST00000592771 EIF4EBP1Q13541 118 aaPredicted RBP11.88□□□□□ -0.51
RANBP3-229ENST00000592771 PYY3Q5JQD4 70 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 HIST3H2BBQ8N257 126 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 FAM216AQ8WUB2 273 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 EDARADDQ8WWZ3 215 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 COQ2Q96H96 371 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 TRAV20A0A0B4J274 112 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 RAB29O14966 203 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 KBTBD11O94819 623 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 PSMB3P49720 205 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 UCNP55089 124 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 TMEM241Q24JQ0 296 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 PRR30Q53SZ7 412 aaPredicted RBP11.88□□□□□ -0.51
RANBP3-229ENST00000592771 FAM209BQ5JX69 171 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 ALKBH2Q6NS38 261 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 MEGF10Q96KG7 1140 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
RANBP3-229ENST00000592771 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 C16orf97H3BN30 126 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 CLDN1O95832 211 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 EGR1P18146 543 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 COL10A1Q03692 680 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 SPNS3Q6ZMD2 512 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 SSX7Q7RTT5 188 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 PITPNC1Q9UKF7 332 aa11.87□□□□□ -0.51
RANBP3-229ENST00000592771 TLN1Q9Y490 2541 aaKnown RBP11.86□□□□□ -0.51
RANBP3-229ENST00000592771 UBE2L5PA0A1B0GUS4 154 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 C12orf77C9JDV5 145 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 PHOX2AO14813 284 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 CLDN14O95500 239 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 GATA4P43694 442 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
RANBP3-229ENST00000592771 NCR3LG1Q68D85 454 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 RPP25LQ8N5L8 163 aaKnown RBP11.86□□□□□ -0.51
RANBP3-229ENST00000592771 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 OR10P1Q8NGE3 313 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 OR10A7Q8NGE5 316 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
RANBP3-229ENST00000592771 PFDN5Q99471 154 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms