RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 RBFOX2O43251 390 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■□□□□ 9
MBD3-209ENST00000592012 HBE1P02100 147 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 TNFRSF1AP19438 455 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 KDF1Q8NAX2 398 aaPredicted RBP16.28■□□□□ 0.2
MBD3-209ENST00000592012 TAF15Q92804 592 aaKnown RBP eCLIP16.28■□□□□ 0.2
MBD3-209ENST00000592012 RBMXL1Q96E39 390 aaKnown RBP16.28■□□□□ 0.2
MBD3-209ENST00000592012 DIRC2Q96SL1 478 aa16.28■□□□□ 0.2
MBD3-209ENST00000592012 RAB7AP51149 207 aa16.27■□□□□ 0.2
MBD3-209ENST00000592012 HAGHQ16775 308 aa16.27■□□□□ 0.2
MBD3-209ENST00000592012 AARDQ4LEZ3 155 aa16.27■□□□□ 0.2
MBD3-209ENST00000592012 AIFM2Q9BRQ8 373 aa16.27■□□□□ 0.2
MBD3-209ENST00000592012 QTRT1Q9BXR0 403 aaKnown RBP16.27■□□□□ 0.2
MBD3-209ENST00000592012 UBE2L5PA0A1B0GUS4 154 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 SPINK9Q5DT21 86 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 ADAM5Q6NVV9 412 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 CLDND2Q8NHS1 167 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 DDB2Q92466 427 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 WFIKKN1Q96NZ8 548 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 LINC00574Q9H8X3 128 aa16.27■□□□□ 0.19
MBD3-209ENST00000592012 YLPM1P49750 1951 aaKnown RBP16.26■□□□□ 0.19
MBD3-209ENST00000592012 SPTA1P02549 2419 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 A0A1W2PPE3 182 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 FAM90A9PA6NNJ1 464 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 ATXN7O15265 892 aaPredicted RBP16.26■□□□□ 0.19
MBD3-209ENST00000592012 RAB2AP61019 212 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 ATP6V1FQ16864 119 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 AKIRIN2Q53H80 203 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 AWAT1Q58HT5 328 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 RND1Q92730 232 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 S1PR3Q99500 378 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 CEBPZOSA8MTT3 80 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 H7C2Y5 167 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 ZNF726P1Q15940 193 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 SOHLH1Q5JUK2 328 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 PRELID3BQ9Y3B1 194 aa16.26■□□□□ 0.19
MBD3-209ENST00000592012 C7orf77A4D0Y5 90 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 AKR1C3P42330 323 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 RBPJQ06330 500 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 ICAM4Q14773 271 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 ZNF506Q5JVG8 444 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 SSX9Q7RTT3 188 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 CENPVQ7Z7K6 275 aaPredicted RBP16.25■□□□□ 0.19
MBD3-209ENST00000592012 VKORC1L1Q8N0U8 176 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 OR10P1Q8NGE3 313 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 MBD3L1Q8WWY6 194 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 CORO2AQ92828 525 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 RPS10P5Q9NQ39 176 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 SMCO4Q9NRQ5 59 aa16.25■□□□□ 0.19
MBD3-209ENST00000592012 SCAF4O95104 1147 aaKnown RBP16.24■□□□□ 0.19
MBD3-209ENST00000592012 OR2B8PP59922 312 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 PINX1Q96BK5 328 aaKnown RBP16.24■□□□□ 0.19
MBD3-209ENST00000592012 ZNF251Q9BRH9 671 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 IGF2RP11717 2491 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 SAA2-SAA4A0A096LPE2 208 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 TMPRSS2O15393 492 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 SNRNP70P08621 437 aaKnown RBP16.24■□□□□ 0.19
MBD3-209ENST00000592012 SRP19P09132 144 aaKnown RBP16.24■□□□□ 0.19
MBD3-209ENST00000592012 SAA2P0DJI9 122 aaPredicted RBP16.24■□□□□ 0.19
MBD3-209ENST00000592012 ZNF439Q8NDP4 499 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 C20orf24Q9BUV8 137 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 TMEM147Q9BVK8 224 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 IDI2-AS1Q9NZ38 188 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 TIMM9Q9Y5J7 89 aa16.24■□□□□ 0.19
MBD3-209ENST00000592012 ZNF729A6NN14 1252 aaPredicted RBP16.23■□□□□ 0.19
MBD3-209ENST00000592012 COLCA2A8K830 154 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 M0R036 132 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 GFRA3O60609 400 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 MMP23AO75900 390 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 NQO2P16083 231 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 KIR2DS2P43631 304 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 PRAMEF5Q5TYX0 476 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 SSX7Q7RTT5 188 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.23■□□□□ 0.19
MBD3-209ENST00000592012 RCC1LQ96I51 464 aaKnown RBP16.23■□□□□ 0.19
MBD3-209ENST00000592012 VKORC1Q9BQB6 163 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 IFNA17P01571 189 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 HSPB1P04792 205 aaKnown RBP16.23■□□□□ 0.19
MBD3-209ENST00000592012 RPS16P62249 146 aaKnown RBP16.23■□□□□ 0.19
MBD3-209ENST00000592012 GNB2P62879 340 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 TLE1Q04724 770 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 TMEM41BQ5BJD5 291 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 CLCC1Q96S66 551 aa16.23■□□□□ 0.19
MBD3-209ENST00000592012 TET2Q6N021 2002 aaPredicted RBP16.22■□□□□ 0.19
MBD3-209ENST00000592012 KHDC3LQ587J8 217 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 FAM122CQ6P4D5 195 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 LCN15Q6UWW0 184 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 OR4A16Q8NH70 328 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 RXFP4Q8TDU9 374 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 SAP30LQ9HAJ7 183 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 RELNP78509 3460 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 C15orf62A8K5M9 175 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 FBP1P09467 338 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 TMPRSS3P57727 454 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 SPCS3P61009 180 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 ERVK-16P61578 105 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 RELBQ01201 579 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 VWC2Q2TAL6 325 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 OR52E5Q8NH55 327 aa16.22■□□□□ 0.19
MBD3-209ENST00000592012 UNKLQ9H9P5 680 aaKnown RBP16.22■□□□□ 0.19
MBD3-209ENST00000592012 TRAV3A0A0B4J244 114 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms