RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CHPT1Q8WUD6 406 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 SOSTQ9BQB4 213 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 FXYD6Q9H0Q3 95 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 METTL1Q9UBP6 276 aaKnown RBP16.85■□□□□ 0.29
ATG4D-212ENST00000590096 AP4M1O00189 453 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 TNFSF12O43508 249 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 GSTZ1O43708 216 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-212ENST00000590096 FBXO24O75426 580 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 RPL30P62888 115 aaKnown RBP16.84■□□□□ 0.29
ATG4D-212ENST00000590096 CATR1Q13166 79 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 EIF4EBP1Q13541 118 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-212ENST00000590096 OR2B11Q5JQS5 317 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 C11orf44Q8N8P7 122 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 HSPB9Q9BQS6 159 aa16.84■□□□□ 0.29
ATG4D-212ENST00000590096 TINAGL1Q9GZM7 467 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-212ENST00000590096 SLC25A17O43808 307 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 RAB3DO95716 219 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 CD74P04233 296 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 KIR2DS2P43631 304 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 PYDC2Q56P42 97 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 SPANXN2Q5MJ10 180 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 STEAP1BQ6NZ63 245 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 LPCAT3Q6P1A2 487 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 CMTM1Q8IZ96 169 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 ARRDC1Q8N5I2 433 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 OR5AU1Q8NGC0 362 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 OR4S2Q8NH73 311 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 OSR1Q8TAX0 266 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-212ENST00000590096 NOL4LQ96MY1 436 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-212ENST00000590096 GPHA2Q96T91 129 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 LINC00527Q9UJ94 153 aa16.83■□□□□ 0.28
ATG4D-212ENST00000590096 PSMB11A5LHX3 300 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 LINC01548A6NM66 108 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 PTBP1P26599 531 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATG4D-212ENST00000590096 GNRHRP30968 328 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 SLC35B1P78383 322 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 MEF2DQ14814 521 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 CCDC190Q86UF4 302 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 STPG2Q8N412 459 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 OR4X2Q8NGF9 303 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 OR6Q1Q8NGQ2 317 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 WIPF2Q8TF74 440 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-212ENST00000590096 GON7Q9BXV9 100 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 V9GYH0 126 aa16.82■□□□□ 0.28
ATG4D-212ENST00000590096 GPR31O00270 319 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 IGLV2-23P01705 113 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 AKAIN1P0CW23 69 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 S100GP29377 79 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 VMA21Q3ZAQ7 101 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 AADACL3Q5VUY0 350 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 SGMS2Q8NHU3 365 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 CLCC1Q96S66 551 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 OR51J1Q9H342 316 aa16.81■□□□□ 0.28
ATG4D-212ENST00000590096 IGHV7-81A0A0B4J1V7 117 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 CD28P10747 220 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 SLC38A6Q8IZM9 456 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 POC5Q8NA72 575 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 OR4D10Q8NGI6 311 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 OR51H1Q8NH63 302 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 THAP7Q9BT49 309 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-212ENST00000590096 PARP11Q9NR21 331 aa16.8■□□□□ 0.28
ATG4D-212ENST00000590096 TET2Q6N021 2002 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-212ENST00000590096 SRRM4A7MD48 611 aaKnown RBP16.79■□□□□ 0.28
ATG4D-212ENST00000590096 DISC1C4P0D8 188 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 PGAM2P15259 253 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 VDAC1P21796 283 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 ETV6P41212 452 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 UCP3P55916 312 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 SCGB2B2Q4G0G5 96 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 ZNF329Q86UD4 541 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 PPP1R27Q86WC6 154 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 SPAG16Q8N0X2 631 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 Q8N402 240 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 ABHD5Q8WTS1 349 aa16.79■□□□□ 0.28
ATG4D-212ENST00000590096 ANKRD20A5PA0PJZ0 165 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 A6NHS1 94 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 M0QZ24 198 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 FCN1O00602 326 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 ATP6V0E1O15342 81 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 PGLYRP1O75594 196 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-212ENST00000590096 CA2P00918 260 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 RLN1P04808 185 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 IGF1P05019 195 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 UBE2KP61086 200 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 CX3CL1P78423 397 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 ZNF79Q15937 498 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 PHLDA2Q53GA4 152 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 C10orf99Q6UWK7 81 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 LHFPL1Q86WI0 220 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 TEX45Q8NA69 505 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 RSRP1Q9BUV0 290 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 TPSG1Q9NRR2 321 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 ZNF580Q9UK33 172 aa16.78■□□□□ 0.28
ATG4D-212ENST00000590096 RBFOX2O43251 390 aaKnown RBP eCLIP16.77■□□□□ 0.28
ATG4D-212ENST00000590096 PPP5CP53041 499 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 C2orf68Q2NKX9 166 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 FAAP20Q6NZ36 180 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 ZNF562Q6V9R5 426 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 COMMD1Q8N668 190 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 OR4C16Q8NGL9 310 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms