RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SNX22Q96L94 193 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 C12orf57Q99622 126 aa12.28□□□□□ -0.44
RETREG3-208ENST00000589797 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.44
RETREG3-208ENST00000589797 HIST1H3AP68431 136 aa12.27□□□□□ -0.44
RETREG3-208ENST00000589797 TNFRSF9Q07011 255 aa12.27□□□□□ -0.44
RETREG3-208ENST00000589797 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.44
RETREG3-208ENST00000589797 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.44
RETREG3-208ENST00000589797 RAXQ9Y2V3 346 aa12.27□□□□□ -0.44
RETREG3-208ENST00000589797 OR10J4P0C629 311 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 SPP1P10451 314 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 CCL3L1P16619 93 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 SIRT7Q9NRC8 400 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 INSIG2Q9Y5U4 225 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 RAB29O14966 203 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 COX7A2P2O60397 106 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 UCP1P25874 307 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 NPY1RP25929 384 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 PLA2G2CQ5R387 149 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 UBTD1Q9HAC8 227 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 ARHGAP21Q5T5U3 1957 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 COL6A3P12111 3177 aa12.27□□□□□ -0.45
RETREG3-208ENST00000589797 REG1AP05451 166 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 RND3P61587 244 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
RETREG3-208ENST00000589797 SS18L1O75177 396 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-208ENST00000589797 DKK1O94907 266 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 B2MP61769 119 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 VMA21Q3ZAQ7 101 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 FAM216AQ8WUB2 273 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 KIAA1456Q9P272 454 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 PITX3O75364 302 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 HLA-GP17693 338 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
RETREG3-208ENST00000589797 TMEM241Q24JQ0 296 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 TRAT1Q6PIZ9 186 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 SH2D2AQ9NP31 389 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 CD1BP29016 333 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 ARF6P62330 175 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-208ENST00000589797 CMTM2Q8TAZ6 248 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 ZDHHC11Q9H8X9 412 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
RETREG3-208ENST00000589797 TMEM42Q69YG0 159 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF561Q8N587 486 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 TAF15Q92804 592 aaKnown RBP eCLIP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 PRO3102Q9H379 93 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 WFDC1Q9HC57 220 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 TRBV6-7A0A0A0MS04 114 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 IQCF6A8MYZ5 107 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 F6UZH7 168 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 PRR30Q53SZ7 412 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 BAGE3Q86Y29 109 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 SNRNP40Q96DI7 357 aaKnown RBP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 K7EM74 188 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 K7N7A8 449 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 SLC25A17O43808 307 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-208ENST00000589797 TCL1AP56279 114 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 ERVFC1-1P60608 527 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 PSG5Q15238 335 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 SLC16A13Q7RTY0 426 aa12.25□□□□□ -0.45
RETREG3-208ENST00000589797 TDGF1P13385 188 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 GAMTQ14353 236 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 BATFQ16520 125 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 TIGITQ495A1 244 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 GP6Q9HCN6 339 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 G3V3Q6 166 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 MLNRO43193 412 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 SCGB1D1O95968 90 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 HPRT1P00492 218 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 DANCRP0C864 163 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 LY6DQ14210 128 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 SPNS3Q6ZMD2 512 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF714Q96N38 554 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 KCNIP2Q9NS61 270 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 TNFRSF19Q9NS68 423 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 CCL20P78556 96 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 SFXN3Q9BWM7 321 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 OR51B2Q9Y5P1 312 aa12.24□□□□□ -0.45
RETREG3-208ENST00000589797 CLDN34H7C241 214 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 PRB4P10163 310 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-208ENST00000589797 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 A8MXK9 166 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 RAB13P51153 203 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 UBE2G1P62253 170 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 RAB24Q969Q5 203 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 SPSB4Q96A44 273 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms