RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 SPCS2Q15005 226 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 TMEM65Q6PI78 240 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 TEX45Q8NA69 505 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 SECTM1Q8WVN6 248 aa12.88□□□□□ -0.35
DNMT1-221ENST00000589538 CCDC59Q9P031 241 aaKnown RBP12.88□□□□□ -0.35
DNMT1-221ENST00000589538 FCN1O00602 326 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 CREBL2O60519 120 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-221ENST00000589538 FCGR3BO75015 233 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 CA2P00918 260 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 IGLV2-23P01705 113 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 FCER2P06734 321 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 PSMB8P28062 276 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
DNMT1-221ENST00000589538 RCVRNP35243 200 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 CDX1P47902 265 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-221ENST00000589538 UBE2KP61086 200 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 AKIRIN2Q53H80 203 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 DHRS11Q6UWP2 260 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 ZNF695Q8IW36 515 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 KLHL30-AS1Q8NEE0 82 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 TCTEX1D2Q8WW35 142 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 CLCC1Q96S66 551 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
DNMT1-221ENST00000589538 RGS5O15539 181 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 IGLV1-40P01703 118 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
DNMT1-221ENST00000589538 CD33P20138 364 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 CD40LGP29965 261 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 NDPQ00604 133 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 CATR1Q13166 79 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 EIF4EBP1Q13541 118 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-221ENST00000589538 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 MFSD4AQ8N468 514 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 ARPC1AQ92747 370 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 DCUN1D5Q9BTE7 237 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 RABL2AQ9UBK7 228 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-221ENST00000589538 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 FOXA2Q9Y261 457 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-221ENST00000589538 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
DNMT1-221ENST00000589538 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 G3V318 75 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 CNIH1O95406 144 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 PMP2P02689 132 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 CRYGBP07316 175 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 MYCNOSP40205 109 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 RFX2P48378 723 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 FXYD4P59646 89 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 FXYD3Q14802 87 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 OR6F1Q8NGZ6 308 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 DYNC2LI1Q8TCX1 351 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 ISOC1Q96CN7 298 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 TMEM68Q96MH6 324 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 ZNF2Q9BSG1 426 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-221ENST00000589538 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
DNMT1-221ENST00000589538 A0A1W2PN81 502 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 SRRM4A7MD48 611 aaKnown RBP12.84□□□□□ -0.35
DNMT1-221ENST00000589538 H3BMQ9 156 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 DUS4LO95620 317 aaKnown RBP12.84□□□□□ -0.35
DNMT1-221ENST00000589538 EGR2P11161 476 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-221ENST00000589538 HLA-DMAP28067 261 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 HRH1P35367 487 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 CHRNA7P36544 502 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 TSPAN5P62079 268 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 RPL30P62888 115 aaKnown RBP12.84□□□□□ -0.35
DNMT1-221ENST00000589538 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 LPCAT3Q6P1A2 487 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 TMEM17Q86X19 198 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 MYOZ3Q8TDC0 251 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 UBE2E2Q96LR5 201 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 TPSG1Q9NRR2 321 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 FBXO7Q9Y3I1 522 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
DNMT1-221ENST00000589538 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.36
DNMT1-221ENST00000589538 ACTL6BO94805 426 aa12.83□□□□□ -0.36
DNMT1-221ENST00000589538 HRASP01112 189 aa12.83□□□□□ -0.36
DNMT1-221ENST00000589538 TBPP20226 339 aa12.83□□□□□ -0.36
DNMT1-221ENST00000589538 GNB1P62873 340 aa12.83□□□□□ -0.36
DNMT1-221ENST00000589538 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
DNMT1-221ENST00000589538 C8orf86Q6ZUL3 223 aa12.83□□□□□ -0.36
DNMT1-221ENST00000589538 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms