RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SP6Q3SY56 376 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 DYNAPQ8N1N2 210 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 OR5R1Q8NH85 324 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 CASTOR1Q8WTX7 329 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 HSD17B10Q99714 261 aaKnown RBP17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 SSX3Q99909 188 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 OR51J1Q9H342 316 aa17.13■□□□□ 0.33
R3HDM4-204ENST00000589428 DUS4LO95620 317 aaKnown RBP17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 IL3RAP26951 378 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 REG1BP48304 166 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 AANATQ16613 207 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 ZNF66Q6ZN08 573 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 KCTD9Q7L273 389 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 CADM3Q8N126 398 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 TMEM158Q8WZ71 300 aa17.12■□□□□ 0.33
R3HDM4-204ENST00000589428 RNF212BA8MTL3 300 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 H0Y980 276 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 LY6LH3BQJ8 138 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 ANKRD55Q3KP44 614 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 FAM71F2Q6NXP2 309 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 TCTEX1D2Q8WW35 142 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 RPEQ96AT9 228 aa17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 MRPL20Q9BYC9 149 aaKnown RBP17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 LIN7CQ9NUP9 197 aaKnown RBP17.11■□□□□ 0.33
R3HDM4-204ENST00000589428 H3BUX3 64 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CATR1Q13166 79 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 TMEM187Q14656 261 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 TPTE2P1Q5T6R2 138 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 GLYATL2Q8WU03 294 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 MITD1Q8WV92 249 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CHIAQ9BZP6 476 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 TMEM222Q9H0R3 208 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 VPREB3Q9UKI3 123 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 KCNIP3Q9Y2W7 256 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 OOSP1A8MZH6 123 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CT45A6P0DMU7 189 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CT45A5P0DMU8 189 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CT45A7P0DMV0 189 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 BRWD1-AS2P59051 145 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 KRTAP24-1Q3LI83 254 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 OR2B11Q5JQS5 317 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 CCDC144NLQ6NUI1 221 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 C11orf88Q6PI97 169 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 ZNF383Q8NA42 475 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 DDB2Q92466 427 aa17.1■□□□□ 0.33
R3HDM4-204ENST00000589428 ANXA3P12429 323 aa17.09■□□□□ 0.33
R3HDM4-204ENST00000589428 TGIF2LXQ8IUE1 241 aa17.09■□□□□ 0.33
R3HDM4-204ENST00000589428 SSNA1O43805 119 aa17.08■□□□□ 0.32
R3HDM4-204ENST00000589428 UCP1P25874 307 aa17.08■□□□□ 0.32
R3HDM4-204ENST00000589428 LIN54Q6MZP7 749 aa17.08■□□□□ 0.32
R3HDM4-204ENST00000589428 C12orf45Q8N5I9 185 aaPredicted RBP17.08■□□□□ 0.32
R3HDM4-204ENST00000589428 PHB2Q99623 299 aa17.08■□□□□ 0.32
R3HDM4-204ENST00000589428 RAMP3O60896 148 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 B3GALNT1O75752 331 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 THBS3P49746 956 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 BCAP31P51572 246 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 DYNLT3P51808 116 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 LIAT1Q6ZQX7 453 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 LHFPL5Q8TAF8 219 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 ADTRPQ96IZ2 230 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 BRS3P32247 399 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 ZNF816Q0VGE8 651 aaPredicted RBP17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 LY6EQ16553 131 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 ZNF585BQ52M93 769 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 SPAG16Q8N0X2 631 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 UXS1Q8NBZ7 420 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 NABP2Q9BQ15 211 aa17.07■□□□□ 0.32
R3HDM4-204ENST00000589428 RRAS2P62070 204 aaPredicted RBP17.06■□□□□ 0.32
R3HDM4-204ENST00000589428 COQ8AQ8NI60 647 aa17.06■□□□□ 0.32
R3HDM4-204ENST00000589428 RBMXL1Q96E39 390 aaKnown RBP17.06■□□□□ 0.32
R3HDM4-204ENST00000589428 C19orf24Q9BVV8 132 aa17.06■□□□□ 0.32
R3HDM4-204ENST00000589428 MED28Q9H204 178 aa17.06■□□□□ 0.32
R3HDM4-204ENST00000589428 A0A0B4J2A0 478 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 A0A1W2PPI3 338 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 DBX1A6NMT0 343 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 GPR137BO60478 399 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 FCGR3BO75015 233 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 CDS2O95674 445 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 GAPDHP04406 335 aaKnown RBP17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 CRYBA1P05813 215 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 SERPINE2P07093 398 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 RAB13P51153 203 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 C2orf68Q2NKX9 166 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 OR8H3Q8N146 312 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 TCTEX1D1Q8N7M0 179 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 OR5AN1Q8NGI8 311 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 TMEM56Q96MV1 263 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 SHPKQ9UHJ6 478 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 PITPNC1Q9UKF7 332 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 PRELID3BQ9Y3B1 194 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 TMEM56-RWDD3S4R434 201 aa17.05■□□□□ 0.32
R3HDM4-204ENST00000589428 IGHV1-3A0A0C4DH29 117 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 FAM181BA6NEQ2 426 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 H0YJW9 148 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 TXNL1O43396 289 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 IGKV1-39P01597 117 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 IGKV1D-39P04432 117 aa17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 RPL15P61313 204 aaKnown RBP17.04■□□□□ 0.32
R3HDM4-204ENST00000589428 SRPXP78539 464 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms