RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.53
NPC1-207ENST00000588867 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
NPC1-207ENST00000588867 C13orf42A0A1B0GVH6 325 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 A0A1W2PPI3 338 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 DBX1A6NMT0 343 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 TIMM23O14925 209 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 HPRT1P00492 218 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 KRASP01116 189 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 SULT1A3P0DMM9 295 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 SULT1A4P0DMN0 295 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 MC5RP33032 325 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 TAGLNQ01995 201 aaKnown RBP11.7□□□□□ -0.54
NPC1-207ENST00000588867 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 LRTM2Q8N967 370 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 C5orf51A6NDU8 294 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 IFNA21P01568 189 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 AKR1C2P52895 323 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 NANPQ8TBE9 248 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 RAB18Q9NP72 206 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 FAM212BQ9NTI7 297 aaPredicted RBP11.7□□□□□ -0.54
NPC1-207ENST00000588867 WASHC3Q9Y3C0 194 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
NPC1-207ENST00000588867 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
NPC1-207ENST00000588867 CD5LO43866 347 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 RRASP10301 218 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 G6PCP35575 357 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 CD83Q01151 205 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 IL22RA2Q969J5 263 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
NPC1-207ENST00000588867 PLEKHA2Q9HB19 425 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
NPC1-207ENST00000588867 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 SHOXO15266 292 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 PFDN1O60925 122 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 CD24P25063 80 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 RAB13P51153 203 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 RPS16P62249 146 aaKnown RBP11.69□□□□□ -0.54
NPC1-207ENST00000588867 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 PDPNQ86YL7 162 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 DMBX1Q8NFW5 382 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 R3HDM4Q96D70 268 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 RRNAD1Q96FB5 475 aaKnown RBP11.69□□□□□ -0.54
NPC1-207ENST00000588867 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 PDCD10Q9BUL8 212 aa11.69□□□□□ -0.54
NPC1-207ENST00000588867 PIGBOS1A0A0B4J2F0 54 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 CCNKO75909 580 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 VDAC1P21796 283 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 ARHGDIBP52566 201 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 H2BFSP57053 126 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
NPC1-207ENST00000588867 GSG1LQ6UXU4 331 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 MS4A7Q9GZW8 240 aaPredicted RBP11.68□□□□□ -0.54
NPC1-207ENST00000588867 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 TMED3Q9Y3Q3 217 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 SVEP1Q4LDE5 3571 aa11.68□□□□□ -0.54
NPC1-207ENST00000588867 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
NPC1-207ENST00000588867 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 ATG12O94817 140 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 NQO2P16083 231 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 HES1Q14469 280 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 HNF4GQ14541 408 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 IZUMO4Q1ZYL8 232 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 AKAP14Q86UN6 197 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 CFHR4Q92496 578 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 OR10C1Q96KK4 312 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 SMR3AQ99954 134 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 ZNF436Q9C0F3 470 aaPredicted RBP11.67□□□□□ -0.54
NPC1-207ENST00000588867 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 ACANP16112 2415 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 DUXBA0A1W2PPF3 345 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 HRASP01112 189 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1D-33P01593 117 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 IGKV1-33P01594 117 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 HLA-GP17693 338 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 CD1BP29016 333 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 ERVK-16P61578 105 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 H2BFWTQ7Z2G1 175 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 GPR146Q96CH1 333 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms