RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RBMY1BA6NDE4 496 aaKnown RBP13.9□□□□□ -0.18
CCDC43-204ENST00000588687 RBMY1EA6NEQ0 496 aaKnown RBP13.9□□□□□ -0.18
CCDC43-204ENST00000588687 ZNF785A8K8V0 405 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 CD7P09564 240 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 RBMY1DP0C7P1 496 aaKnown RBP13.9□□□□□ -0.18
CCDC43-204ENST00000588687 SERPINB10P48595 397 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 CD81P60033 236 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 SPHARQ15513 63 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 CD300EQ496F6 205 aaPredicted RBP13.9□□□□□ -0.18
CCDC43-204ENST00000588687 IGSF11Q5DX21 431 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 LAX1Q8IWV1 398 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 AKIP1Q9NQ31 210 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 DMRT1Q9Y5R6 373 aa13.9□□□□□ -0.18
CCDC43-204ENST00000588687 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 MSGN1A6NI15 193 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 FABP7O15540 132 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 DIRAS3O95661 229 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 FCGR3AP08637 254 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 EDN2P20800 178 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 CLDN12P56749 244 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 UBE2KP61086 200 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 IRF3Q14653 427 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 PRSS8Q16651 343 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 SRSF12Q8WXF0 261 aaKnown RBP13.89□□□□□ -0.19
CCDC43-204ENST00000588687 SNAPC3Q92966 411 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 NEURL2Q9BR09 285 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 ZC4H2Q9NQZ6 224 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 HERC2O95714 4834 aa13.89□□□□□ -0.19
CCDC43-204ENST00000588687 DNAH10Q8IVF4 4471 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 SHOXO15266 292 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 AIREO43918 545 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 PRH1P02810 166 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 RHOGP84095 191 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 EXOSC2Q13868 293 aaKnown RBP13.88□□□□□ -0.19
CCDC43-204ENST00000588687 LIPKQ5VXJ0 399 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 PLGRKTQ9HBL7 147 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 PEMTQ9UBM1 199 aa13.88□□□□□ -0.19
CCDC43-204ENST00000588687 AK6Q9Y3D8 172 aaKnown RBP13.88□□□□□ -0.19
CCDC43-204ENST00000588687 FAM223BA6NKX1 122 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 LINC00473A8K010 186 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 BET1O15155 118 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 DUTP33316 252 aaKnown RBP13.87□□□□□ -0.19
CCDC43-204ENST00000588687 RPS25P62851 125 aaKnown RBP13.87□□□□□ -0.19
CCDC43-204ENST00000588687 TAGLNQ01995 201 aaKnown RBP13.87□□□□□ -0.19
CCDC43-204ENST00000588687 RAB11BQ15907 218 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 TATDN3Q17R31 274 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
CCDC43-204ENST00000588687 FAM223AQ8IWN6 122 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 DEFB125Q8N687 156 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 TEX45Q8NA69 505 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 OR56B1Q8NGI3 324 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 TMEM203Q969S6 136 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 FAM3DQ96BQ1 224 aa13.87□□□□□ -0.19
CCDC43-204ENST00000588687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.86□□□□□ -0.19
CCDC43-204ENST00000588687 A0A0B4J203 849 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 TPPPO94811 219 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 GSTT2P0CG29 244 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 GSTT2BP0CG30 244 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 TNXAQ16473 311 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 DEFB114Q30KQ6 69 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 C10orf55Q5SWW7 151 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 PHB2Q99623 299 aa13.86□□□□□ -0.19
CCDC43-204ENST00000588687 ZNF430Q9H8G1 570 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-204ENST00000588687 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 MFNGO00587 321 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-204ENST00000588687 CRYZL1O95825 349 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 RRASP10301 218 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 TPBGQ13641 420 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 RCN1Q15293 331 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 MED22Q15528 200 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 C2orf76Q3KRA6 126 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 VMA21Q3ZAQ7 101 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 MAFIPQ8WZ33 124 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 UFD1Q92890 307 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 SRD5A3Q9H8P0 318 aa13.85□□□□□ -0.19
CCDC43-204ENST00000588687 C2orf70A6NJV1 201 aa13.84□□□□□ -0.19
CCDC43-204ENST00000588687 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
CCDC43-204ENST00000588687 SAA1P0DJI8 122 aaPredicted RBP13.84□□□□□ -0.19
CCDC43-204ENST00000588687 CBX3Q13185 183 aa13.84□□□□□ -0.19
CCDC43-204ENST00000588687 H1FOOQ8IZA3 346 aaPredicted RBP13.84□□□□□ -0.19
CCDC43-204ENST00000588687 SLC2A8Q9NY64 477 aa13.84□□□□□ -0.19
CCDC43-204ENST00000588687 HECTD4Q9Y4D8 3996 aa13.83□□□□□ -0.19
CCDC43-204ENST00000588687 IGKV1D-8A0A087WSZ0 117 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 OR11H12B2RN74 326 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 PPP5D1E7EU14 171 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 PTGES3LE9PB15 166 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 KIR2DS2P43631 304 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 C19orf35Q6ZS72 473 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 TTC9CQ8N5M4 171 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 OSR1Q8TAX0 266 aaPredicted RBP13.83□□□□□ -0.2
CCDC43-204ENST00000588687 ACOT12Q8WYK0 555 aa13.83□□□□□ -0.2
CCDC43-204ENST00000588687 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms