RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 LCNL1Q6ZST4 164 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 ANKRD13BQ86YJ7 626 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 GVQW1Q8N7I0 195 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 OR5M8Q8NGP6 311 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 S100A16Q96FQ6 103 aaKnown RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 KLK15Q9H2R5 256 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 FOXA2Q9Y261 457 aaPredicted RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 VSIG4Q9Y279 399 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 RBMX2Q9Y388 322 aaKnown RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
TPM4-209ENST00000588483 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
TPM4-209ENST00000588483 SRRM4A7MD48 611 aaKnown RBP8.16□□□□□ -1.1
TPM4-209ENST00000588483 H3BUA1 57 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 ARPC1BO15143 372 aaKnown RBP8.16□□□□□ -1.1
TPM4-209ENST00000588483 NAT1P18440 290 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 UBE2KP61086 200 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 CTF1Q16619 201 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 ECSCRQ19T08 205 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 SAMD12Q8N8I0 201 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 TEX45Q8NA69 505 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 BVESQ8NE79 360 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 OR5AP2Q8NGF4 316 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 ARPC1AQ92747 370 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 TPSG1Q9NRR2 321 aa8.16□□□□□ -1.1
TPM4-209ENST00000588483 A0A1W2PN81 502 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 SHOXO15266 292 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 APOA1P02647 267 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 CHRNA7P36544 502 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 ALDH3B2P48448 385 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 TAS2R20P59543 309 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 ARPC4P59998 168 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 VBP1P61758 197 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 FXYD3Q14802 87 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 DEFB136Q30KP8 78 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 ACTBL2Q562R1 376 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 TMEM69Q5SWH9 247 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 ZNF66Q6ZN08 573 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 ZBTB34Q8NCN2 500 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 LFNGQ8NES3 379 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 GIMAP1Q8WWP7 306 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 HSD17B10Q99714 261 aaKnown RBP8.15□□□□□ -1.1
TPM4-209ENST00000588483 MRPS26Q9BYN8 205 aaKnown RBP8.15□□□□□ -1.1
TPM4-209ENST00000588483 SLA2Q9H6Q3 261 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 GNB4Q9HAV0 340 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 AURKAIP1Q9NWT8 199 aaPredicted RBP8.15□□□□□ -1.1
TPM4-209ENST00000588483 PRELID3BQ9Y3B1 194 aa8.15□□□□□ -1.1
TPM4-209ENST00000588483 CRYZL1O95825 349 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 PPYP01298 95 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 PTHLHP12272 177 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 FCGR2CP31995 323 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 BRWD1-AS2P59051 145 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 RPL30P62888 115 aaKnown RBP8.14□□□□□ -1.11
TPM4-209ENST00000588483 PJVKQ0ZLH3 352 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 CDK10Q15131 360 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 PRSS8Q16651 343 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 VMA21Q3ZAQ7 101 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 ASPHD1Q5U4P2 390 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 UNQ5815/PRO19632Q6UWF5 114 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 DHRS11Q6UWP2 260 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 DUX3Q96PT4 197 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 FAM103A1Q9BTL3 118 aaKnown RBP8.14□□□□□ -1.11
TPM4-209ENST00000588483 ADAM30Q9UKF2 790 aa8.14□□□□□ -1.11
TPM4-209ENST00000588483 MRPS7Q9Y2R9 242 aaKnown RBP8.14□□□□□ -1.11
TPM4-209ENST00000588483 RBFOX2O43251 390 aaKnown RBP eCLIP8.13□□□□□ -1.11
TPM4-209ENST00000588483 CREBL2O60519 120 aaPredicted RBP8.13□□□□□ -1.11
TPM4-209ENST00000588483 FCGR3BO75015 233 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 TPPPO94811 219 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 EIF4EP06730 217 aaKnown RBP8.13□□□□□ -1.11
TPM4-209ENST00000588483 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
TPM4-209ENST00000588483 OR8U8P0C7N1 319 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 AADACP22760 399 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 KIR2DS2P43631 304 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 RORCP51449 518 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 KRTAP10-11P60412 298 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 GNB1P62873 340 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 ZNF616Q08AN1 781 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 MFSD4AQ8N468 514 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 POC5Q8NA72 575 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 OR4S2Q8NH73 311 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 GPX8Q8TED1 209 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 RHOVQ96L33 236 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 NAA50Q9GZZ1 169 aaKnown RBP8.13□□□□□ -1.11
TPM4-209ENST00000588483 SCPEP1Q9HB40 452 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 ZMAT5Q9UDW3 170 aaKnown RBP8.13□□□□□ -1.11
TPM4-209ENST00000588483 A3GALT2U3KPV4 340 aa8.13□□□□□ -1.11
TPM4-209ENST00000588483 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
TPM4-209ENST00000588483 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
TPM4-209ENST00000588483 FGF2P09038 288 aa8.12□□□□□ -1.11
TPM4-209ENST00000588483 SAA1P0DJI8 122 aaPredicted RBP8.12□□□□□ -1.11
TPM4-209ENST00000588483 CD40LGP29965 261 aa8.12□□□□□ -1.11
TPM4-209ENST00000588483 PRSS3P35030 304 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms