RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 OR6F1Q8NGZ6 308 aa12.36□□□□□ -0.43
NCLN-203ENST00000587740 SMIM4Q8WVI0 70 aa12.36□□□□□ -0.43
NCLN-203ENST00000587740 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
NCLN-203ENST00000587740 ADTRPQ96IZ2 230 aa12.36□□□□□ -0.43
NCLN-203ENST00000587740 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
NCLN-203ENST00000587740 ZNF2Q9BSG1 426 aaPredicted RBP12.36□□□□□ -0.43
NCLN-203ENST00000587740 LINC00205P59089 165 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
NCLN-203ENST00000587740 CBX3Q13185 183 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 C9orf152Q5JTZ5 239 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 ZNF383Q8NA42 475 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 TMEM229BQ8NBD8 167 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
NCLN-203ENST00000587740 C5orf30Q96GV9 206 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 SLC5A7Q9GZV3 580 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 SLC35D1Q9NTN3 355 aa12.35□□□□□ -0.43
NCLN-203ENST00000587740 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
NCLN-203ENST00000587740 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 GSTZ1O43708 216 aaPredicted RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 CD3DP04234 171 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 AMY1AP04745 511 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 AMY2AP04746 511 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 IFNA6P05013 189 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 DUTP33316 252 aaKnown RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 F2RL1P55085 397 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 TAS2R19P59542 299 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 MMDQ15546 238 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 SPANXN2Q5MJ10 180 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 ZNF660Q6AZW8 331 aaPredicted RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 PDPNQ86YL7 162 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 CCL28Q9NRJ3 127 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 PLSCR3Q9NRY6 295 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 ZNF107Q9UII5 783 aaPredicted RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
NCLN-203ENST00000587740 U3KQK5 164 aa12.34□□□□□ -0.43
NCLN-203ENST00000587740 M0QYG6 137 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 IGLV2-14P01704 120 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 RRASP10301 218 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 TBPP20226 339 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.44
NCLN-203ENST00000587740 MSMO1Q15800 293 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 RTL8BQ17RB0 113 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 CCDC190Q86UF4 302 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 Q8N9W7 124 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 BORCS5Q969J3 196 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 FLYWCH2Q96CP2 140 aaKnown RBP12.33□□□□□ -0.44
NCLN-203ENST00000587740 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
NCLN-203ENST00000587740 RNF5Q99942 180 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 TAS2R8Q9NYW2 309 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
NCLN-203ENST00000587740 SH2D7A6NKC9 451 aaPredicted RBP12.32□□□□□ -0.44
NCLN-203ENST00000587740 LINC00473A8K010 186 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 NBR2O15453 112 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 RAB3DO95716 219 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 RPS16P62249 146 aaKnown RBP12.32□□□□□ -0.44
NCLN-203ENST00000587740 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 KCTD9Q7L273 389 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 BVESQ8NE79 360 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 RITA1Q96K30 269 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 TINAGL1Q9GZM7 467 aaPredicted RBP12.32□□□□□ -0.44
NCLN-203ENST00000587740 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
NCLN-203ENST00000587740 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 V9GYH0 126 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
NCLN-203ENST00000587740 CD74P04233 296 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
NCLN-203ENST00000587740 CNTFRP26992 372 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 ETV6P41212 452 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 ZNF66Q6ZN08 573 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 ZNF818PQ6ZRF7 136 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 ARRDC1Q8N5I2 433 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 FAM71E2Q8N5Q1 922 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 NPBQ8NG41 125 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 OR4X2Q8NGF9 303 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 DDB2Q92466 427 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 TSNAXQ99598 290 aaKnown RBP12.31□□□□□ -0.44
NCLN-203ENST00000587740 THAP7Q9BT49 309 aaPredicted RBP12.31□□□□□ -0.44
NCLN-203ENST00000587740 FXYD6Q9H0Q3 95 aa12.31□□□□□ -0.44
NCLN-203ENST00000587740 C3orf84H3BNL1 204 aa12.3□□□□□ -0.44
NCLN-203ENST00000587740 TNFSF12O43508 249 aa12.3□□□□□ -0.44
NCLN-203ENST00000587740 NDUFA3O95167 84 aa12.3□□□□□ -0.44
NCLN-203ENST00000587740 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
NCLN-203ENST00000587740 CATR1Q13166 79 aa12.3□□□□□ -0.44
NCLN-203ENST00000587740 EIF4EBP1Q13541 118 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms