RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NQO2P16083 231 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 ERVK-16P61578 105 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 MIDNQ504T8 468 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 CLEC9AQ6UXN8 241 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 BAP18Q8IXM2 172 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 LY6G5BQ8NDX9 201 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 CCL19Q99731 98 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 SMIM3Q9BZL3 60 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 C22orf46C9J442 243 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 RBMXL2O75526 392 aaKnown RBP16.2■□□□□ 0.18
TRIM47-204ENST00000587339 CRYZL1O95825 349 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 EWSR1Q01844 656 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM47-204ENST00000587339 NHLH2Q02577 135 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 CLLU1Q5K131 121 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 SSX9Q7RTT3 188 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 IGFBPL1Q8WX77 278 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 TMEM186Q96B77 213 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 SLC25A31Q9H0C2 315 aa16.2■□□□□ 0.18
TRIM47-204ENST00000587339 PAX9P55771 341 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 TNFRSF9Q07011 255 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 TMEM252Q8N6L7 170 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 PCNPQ8WW12 178 aaKnown RBP16.19■□□□□ 0.18
TRIM47-204ENST00000587339 ONECUT1Q9UBC0 465 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 WSB1Q9Y6I7 421 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 RPS10-NUDT3A0A1W2PQS6 291 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 UBE2KP61086 200 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 RPL23AP62750 156 aaKnown RBP16.19■□□□□ 0.18
TRIM47-204ENST00000587339 EIF5AP63241 154 aaKnown RBP16.19■□□□□ 0.18
TRIM47-204ENST00000587339 RTL8BQ17RB0 113 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 RPL7L1Q6DKI1 246 aaKnown RBP16.19■□□□□ 0.18
TRIM47-204ENST00000587339 VKORC1L1Q8N0U8 176 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 HSPB7Q9UBY9 170 aa16.19■□□□□ 0.18
TRIM47-204ENST00000587339 LOC105371242A0A075B767 164 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 IGHV2-26A0A0B4J1V2 119 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 IGSF23A1L1A6 192 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 JTBO76095 146 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 FAM71F2Q6NXP2 309 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 TNFRSF14Q92956 283 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 BSCL2Q96G97 398 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-204ENST00000587339 SLC35D1Q9NTN3 355 aa16.18■□□□□ 0.18
TRIM47-204ENST00000587339 FAM90A9PA6NNJ1 464 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 IGHV4-39P01824 125 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
TRIM47-204ENST00000587339 REG1BP48304 166 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 MRPL20Q9BYC9 149 aaKnown RBP16.17■□□□□ 0.18
TRIM47-204ENST00000587339 H3BP45 60 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 MED6O75586 246 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 OR9G9P0C7N8 305 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 IAPPP10997 89 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 IL3RAP26951 378 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 ARHGDIBP52566 201 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 ZNF137PP52743 207 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 PRRX1P54821 245 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 DLX1P56177 255 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 DHRS7BQ6IAN0 325 aaPredicted RBP16.17■□□□□ 0.18
TRIM47-204ENST00000587339 ZNF295-AS1Q8N0V1 137 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 ST6GALNAC6Q969X2 333 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 RHOVQ96L33 236 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 CLEC7AQ9BXN2 247 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 BPESC1Q9GZL8 116 aa16.17■□□□□ 0.18
TRIM47-204ENST00000587339 HRASP01112 189 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 APOA2P02652 100 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 BAXQ07812 192 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 FAM74A1Q5RGS3 127 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 RBKSQ9H477 322 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 TMEM140Q9NV12 185 aa16.16■□□□□ 0.18
TRIM47-204ENST00000587339 A1L4Q6 167 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 CST7O76096 145 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 IGHV2-5P01817 119 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 IGKV1-16P04430 117 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 COX6B1P14854 86 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 TAS2R30P59541 319 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 ARF6P62330 175 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 TAGLNQ01995 201 aaKnown RBP16.15■□□□□ 0.18
TRIM47-204ENST00000587339 DIAPH2-AS1Q14236 149 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 OR5AN1Q8NGI8 311 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 OR13D1Q8NGV5 346 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 OR4A16Q8NH70 328 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 SMIM8Q96KF7 97 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 PSENENQ9NZ42 101 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 AKAP6Q13023 2319 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 H7C2Y5 167 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 TXNL1O43396 289 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 IGLV1-47P01700 117 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 NMBP08949 121 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 OR2B8PP59922 312 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 PRB3Q04118 309 aaPredicted RBP16.15■□□□□ 0.18
TRIM47-204ENST00000587339 HLA-DRB5Q30154 266 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 SP5Q6BEB4 398 aaPredicted RBP16.15■□□□□ 0.18
TRIM47-204ENST00000587339 STX12Q86Y82 276 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 TGIF2LXQ8IUE1 241 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 UBAC2Q8NBM4 344 aa16.15■□□□□ 0.18
TRIM47-204ENST00000587339 BORCS7-ASMTA0A0B4J1R7 106 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 H0YJW9 148 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 RRASP10301 218 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 COX7A1P24310 79 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 PDLIM4P50479 330 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 OR4A47Q6IF82 309 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 TMEM217Q8N7C4 229 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms