RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SPAG16Q8N0X2 631 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 DRAXINQ8NBI3 349 aaPredicted RBP12.06□□□□□ -0.48
NFIX-208ENST00000587260 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 LHFPL5Q8TAF8 219 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 RPEQ96AT9 228 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 PRR13Q9NZ81 148 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 TBL2Q9Y4P3 447 aaKnown RBP12.06□□□□□ -0.48
NFIX-208ENST00000587260 OOSP1A8MZH6 123 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 HNF1AP20823 631 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
NFIX-208ENST00000587260 LINC00205P59089 165 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 SSX2Q16385 188 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 C2orf68Q2NKX9 166 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 LIN54Q6MZP7 749 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 SELENOHQ8IZQ5 122 aaKnown RBP12.05□□□□□ -0.48
NFIX-208ENST00000587260 DYNAPQ8N1N2 210 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 UXS1Q8NBZ7 420 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
NFIX-208ENST00000587260 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
NFIX-208ENST00000587260 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
NFIX-208ENST00000587260 MDFIC2A0A1B0GVS7 189 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 RAMP3O60896 148 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 OR2A4O95047 310 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 RRASP10301 218 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 CXCL3P19876 107 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 ZNF695Q8IW36 515 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 BCL6BQ8N143 479 aaPredicted RBP12.04□□□□□ -0.48
NFIX-208ENST00000587260 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
NFIX-208ENST00000587260 PLEKHA2Q9HB19 425 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 TMED3Q9Y3Q3 217 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 F8P00451 2351 aa12.04□□□□□ -0.48
NFIX-208ENST00000587260 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
NFIX-208ENST00000587260 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 HPRT1P00492 218 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 VDAC1P21796 283 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 MC5RP33032 325 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 LPAR6P43657 344 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
NFIX-208ENST00000587260 DHRS7BQ6IAN0 325 aaPredicted RBP12.03□□□□□ -0.48
NFIX-208ENST00000587260 LYZL2Q7Z4W2 148 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 ASB13Q8WXK3 278 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 RBMXL1Q96E39 390 aaKnown RBP12.03□□□□□ -0.48
NFIX-208ENST00000587260 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
NFIX-208ENST00000587260 TEP1Q99973 2627 aaKnown RBP12.02□□□□□ -0.48
NFIX-208ENST00000587260 IGHV1-3A0A0C4DH29 117 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 H0YJW9 148 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 GOSR2O14653 212 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 FCGR3BO75015 233 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 H2BFSP57053 126 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.48
NFIX-208ENST00000587260 RTL8BQ17RB0 113 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 AKAP14Q86UN6 197 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 OR8H3Q8N146 312 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 SLC35G3Q8N808 338 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 OR4S2Q8NH73 311 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 LSM10Q969L4 123 aaKnown RBP12.02□□□□□ -0.48
NFIX-208ENST00000587260 MALSU1Q96EH3 234 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 ST6GAL2Q96JF0 529 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 TMEM160Q9NX00 188 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 COMMD9Q9P000 198 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.48
NFIX-208ENST00000587260 A0A1W2PPI3 338 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 PFDN1O60925 122 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 ADAP1O75689 374 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 CCNKO75909 580 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 ATG12O94817 140 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 IFNA21P01568 189 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 APOA2P02652 100 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 BPIFB3P59826 476 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 OR2B11Q5JQS5 317 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 CCDC144NLQ6NUI1 221 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 MOB3BQ86TA1 216 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 ZNF436Q9C0F3 470 aaPredicted RBP12.01□□□□□ -0.49
NFIX-208ENST00000587260 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 IGHV3-72A0A0B4J1Y9 119 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 S1PR2O95136 353 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 HOXB5P09067 269 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 P0C879 139 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 POU2AF1Q16633 256 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 DEFB112Q30KQ8 113 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 GSG1LQ6UXU4 331 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 FAM219AQ8IW50 185 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 SEC22AQ96IW7 307 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 WASHC3Q9Y3C0 194 aa12.01□□□□□ -0.49
NFIX-208ENST00000587260 ANK3Q12955 4377 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms