RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 H0YJW9 148 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 RAB27BO00194 218 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 SOCS1O15524 211 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 GSTP1P09211 210 aaKnown RBP8.9□□□□□ -0.98
LIG3-207ENST00000586119 VEGFCP49767 419 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 TPPP2P59282 170 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 PITPNAQ00169 270 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 PLGLAQ15195 96 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 ACTBL2Q562R1 376 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 UBE2NLQ5JXB2 153 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 LY6G6FQ5SQ64 297 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 OR5H6Q8NGV6 325 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 OR10R2Q8NGX6 335 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 SETD6Q8TBK2 473 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 OR4C12Q96R67 309 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 HDHD3Q9BSH5 251 aaPredicted RBP8.9□□□□□ -0.98
LIG3-207ENST00000586119 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 ATG5Q9H1Y0 275 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 GHITMQ9H3K2 345 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 RIMS4Q9H426 269 aaPredicted RBP8.9□□□□□ -0.98
LIG3-207ENST00000586119 DIABLOQ9NR28 239 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 PLEKHJ1Q9NW61 149 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 RNF150Q9ULK6 438 aa8.9□□□□□ -0.98
LIG3-207ENST00000586119 A0A0A6YYD4 124 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 H7C2Y5 167 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 ARPC1BO15143 372 aaKnown RBP8.89□□□□□ -0.99
LIG3-207ENST00000586119 RGS11O94810 467 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 CA2P00918 260 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 IGLV1-51P01701 117 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 APOA1P02647 267 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 OR8U9P0C7N5 309 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 TMEM50BP56557 158 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 PLA2G7Q13093 441 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 PSG5Q15238 335 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 IL34Q6ZMJ4 242 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 FLYWCH2Q96CP2 140 aaKnown RBP8.89□□□□□ -0.99
LIG3-207ENST00000586119 SLC25A38Q96DW6 304 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 RAB3CQ96E17 227 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
LIG3-207ENST00000586119 AGMATQ9BSE5 352 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 C11orf54Q9H0W9 315 aaPredicted RBP8.89□□□□□ -0.99
LIG3-207ENST00000586119 PTTG2Q9NZH5 202 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 OR1A1Q9P1Q5 309 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 SLC23A1Q9UHI7 598 aa8.89□□□□□ -0.99
LIG3-207ENST00000586119 RAB29O14966 203 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 TPPPO94811 219 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 TRGV3P03979 118 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
LIG3-207ENST00000586119 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
LIG3-207ENST00000586119 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 CNPY1Q3B7I2 92 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 AKIRIN2Q53H80 203 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 ZNF880Q6PDB4 577 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 ZNF554Q86TJ5 538 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 SAMD12Q8N8I0 201 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 ARHGAP5-AS1Q96IT6 56 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 PECRQ9BY49 303 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 SLIRPQ9GZT3 109 aaKnown RBP8.88□□□□□ -0.99
LIG3-207ENST00000586119 NXF2Q9GZY0 626 aaKnown RBP8.88□□□□□ -0.99
LIG3-207ENST00000586119 ZNF355PQ9NSJ1 428 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 PIPOXQ9P0Z9 390 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 COMMD3Q9UBI1 195 aa8.88□□□□□ -0.99
LIG3-207ENST00000586119 METTL1Q9UBP6 276 aaKnown RBP8.88□□□□□ -0.99
LIG3-207ENST00000586119 TRBV6-6A0A0A6YYG2 114 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 MFNGO00587 321 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 XRCC3O43542 346 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 NAPSAO96009 420 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 TRBV12-3P01733 135 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 IGKV1-16P04430 117 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 SCTP09683 121 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 CEACAM6P40199 344 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 TMEM267Q0VDI3 215 aaPredicted RBP8.87□□□□□ -0.99
LIG3-207ENST00000586119 FXYD3Q14802 87 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 HAGHQ16775 308 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 MOGAT2Q3SYC2 334 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 ZNF562Q6V9R5 426 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 TCTEX1D1Q8N7M0 179 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 MCFD2Q8NI22 146 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 GRPEL2Q8TAA5 225 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 CHMP1AQ9HD42 196 aaPredicted RBP8.87□□□□□ -0.99
LIG3-207ENST00000586119 RETNQ9HD89 108 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 C12orf4Q9NQ89 552 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 RABL2AQ9UBK7 228 aaPredicted RBP8.87□□□□□ -0.99
LIG3-207ENST00000586119 AK3Q9UIJ7 227 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 MGAT4AQ9UM21 535 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 RABL2BQ9UNT1 228 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 WASHC3Q9Y3C0 194 aa8.87□□□□□ -0.99
LIG3-207ENST00000586119 OR5H14A6NHG9 310 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 A8MZ25 164 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 HSPA12AO43301 675 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
LIG3-207ENST00000586119 CD3GP09693 182 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms