RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	SRRM4	A7MD48	611 aa	Known RBP	11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	MPPED1	O15442	326 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	RBMXL2	O75526	392 aa	Known RBP	11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	ARL6IP5	O75915	188 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	FCGR3A	P08637	254 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	RTL8B	Q17RB0	113 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	LCN12	Q6JVE5	192 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	ZNF343	Q6P1L6	599 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	IDO2	Q6ZQW0	420 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR10J5	Q8NHC4	309 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	ACOT12	Q8WYK0	555 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	CABLES2	Q9BTV7	478 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	CCDC90B	Q9GZT6	254 aa		11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.52	□□□□□ -0.57
SREBF1-222	ENST00000583732	HYDIN	Q4G0P3	5121 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	MSGN1	A6NI15	193 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	PRH1	P02810	166 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	IFNA6	P05013	189 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	GNB3	P16520	340 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	FABP5	Q01469	135 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TPBG	Q13641	420 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TRAM1	Q15629	374 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TATDN3	Q17R31	274 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	MRGPRG-AS1	Q2M3A8	158 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	VMA21	Q3ZAQ7	101 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TMEM177	Q53S58	311 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732		Q8N402	240 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	RAB3C	Q96E17	227 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TMEM68	Q96MH6	324 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	FAM110A	Q9BQ89	295 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	GINS4	Q9BRT9	223 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	THAP7	Q9BT49	309 aa	Predicted RBP	11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	PLEKHA3	Q9HB20	300 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	KCNK7	Q9Y2U2	307 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732		V9GY05	133 aa		11.51	□□□□□ -0.57
SREBF1-222	ENST00000583732	TRBV6-7	A0A0A0MS04	114 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732		A0A0B4J203	849 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732		J3QRK9	145 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	RGS10	O43665	173 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	CRYZL1	O95825	349 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	MAP2K4	P45985	399 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	TAGLN	Q01995	201 aa	Known RBP	11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	EXOSC2	Q13868	293 aa	Known RBP	11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	ADAD2	Q8NCV1	583 aa	Known RBP	11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	SRSF12	Q8WXF0	261 aa	Known RBP	11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	USMG5	Q96IX5	58 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	RAB22A	Q9UL26	194 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	TPRKB	Q9Y3C4	175 aa		11.5	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR2A4	O95047	310 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR9G9	P0C7N8	305 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	RRAS	P10301	218 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	PSMA1	P25786	263 aa	Known RBP	11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	AQP4	P55087	323 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR10A3	P58181	314 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	CD81	P60033	236 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	RHOG	P84095	191 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	MLLT11	Q13015	90 aa	Predicted RBP	11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	PRSS8	Q16651	343 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR10R2	Q8NGX6	335 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	SNAPC3	Q92966	411 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	AKIP1	Q9NQ31	210 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	PEMT	Q9UBM1	199 aa		11.49	□□□□□ -0.57
SREBF1-222	ENST00000583732	BIRC6	Q9NR09	4857 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	LINC00473	A8K010	186 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	ANKRD65	E5RJM6	399 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	BMPR1B	O00238	502 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	MFNG	O00587	321 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	BRI3	O95415	125 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	EDN2	P20800	178 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	GADD45A	P24522	165 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	DUT	P33316	252 aa	Known RBP	11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	UBE2K	P61086	200 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	ZNF45	Q02386	682 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	ARFRP1	Q13795	201 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR2B11	Q5JQS5	317 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	C10orf55	Q5SWW7	151 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	TEX45	Q8NA69	505 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	DDB2	Q92466	427 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	SELENOK	Q9Y6D0	94 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	CEPT1	Q9Y6K0	416 aa		11.48	□□□□□ -0.57
SREBF1-222	ENST00000583732	TNC	P24821	2201 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	IGKV1D-8	A0A087WSZ0	117 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	SHISA3	A0PJX4	238 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	HIST1H1D	P16402	221 aa	Known RBP	11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	TALDO1	P37837	337 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	ATP5G2	Q06055	141 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	CD300E	Q496F6	205 aa	Predicted RBP	11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	DYNLRB2	Q8TF09	96 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	ADTRP	Q96IZ2	230 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	MGLL	Q99685	303 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	NEURL2	Q9BR09	285 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	DCUN1D5	Q9BTE7	237 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	WFDC10A	Q9H1F0	79 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	DUSP21	Q9H596	190 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	SIGLEC8	Q9NYZ4	499 aa		11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.47	□□□□□ -0.57
SREBF1-222	ENST00000583732	ALMS1	Q8TCU4	4167 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	FAM223B	A6NKX1	122 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	PPP5D1	E7EU14	171 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms