RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 PERPQ96FX8 193 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 IGHV2-26A0A0B4J1V2 119 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 H3BP45 60 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 A0A0J9YW62 118 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 KLRC4-KLRK1H3BQV0 150 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 MSTNO14793 375 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZIC3O60481 467 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 CTRLP40313 264 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 TAS2R46P59540 309 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 HSD52Q0P140 79 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR10V1Q8NGI7 309 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 SGMS2Q8NHU3 365 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 PLEKHF2Q9H8W4 249 aa13.12□□□□□ -0.31
TRAPPC8-210ENST00000582513 TRBV7-9A0A0J9YWB2 115 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 ABCA11PQ4W5N1 156 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 LYSMD4Q5XG99 296 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 LIME1Q9H400 295 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF835Q9Y2P0 537 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 FRYQ5TBA9 3013 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 CEACAM18A8MTB9 384 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 FOXI3A8MTJ6 420 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 TNFSF15O95150 251 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 CFIP05156 583 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 NTF4P34130 210 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 FCN1O00602 326 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 SNAI2O43623 268 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 SSSCA1O60232 199 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 EGR1P18146 543 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZIC4Q8N9L1 334 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZDBF2Q9HCK1 2354 aa13.11□□□□□ -0.31
TRAPPC8-210ENST00000582513 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 GYPAP02724 150 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 C3orf79P0CE67 100 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 CD1BP29016 333 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 LHX2P50458 406 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 CLDN15P56746 228 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR2C3Q8N628 320 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 NPVFQ9HCQ7 196 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 TIMM8BQ9Y5J9 83 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 LRP5LA4QPB2 252 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 FAM231BA6NCW3 169 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 IGLC1P0CG04 106 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 LIFP15018 202 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 B4GALT1P15291 398 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 C5orf64Q2M2E5 130 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 CCDC144NLQ6NUI1 221 aa13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC8-210ENST00000582513 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 C7orf71A4D174 169 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 FIGNL2A6NMB9 653 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 B5MCH6 92 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 H3BUT2 72 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 IFNA1P01562 189 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 DYNLT3P51808 116 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 ATP5J2P56134 94 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 PMP22Q01453 160 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 IL15RAQ13261 267 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 IGKV1-27A0A075B6S5 117 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 H0Y8G0 127 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 GATA2P23769 480 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 UBALD2Q8IYN6 164 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 FBXL14Q8N1E6 418 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 NXT1Q9UKK6 140 aaKnown RBP13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 DYSFO75923 2080 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 TEX48A0A1B0GUV7 120 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 PATE3B3GLJ2 98 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF737O75373 536 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 PIGYQ3MUY2 71 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 PP6455Q8WZ26 134 aa13.09□□□□□ -0.31
TRAPPC8-210ENST00000582513 DOCK7Q96N67 2140 aa13.08□□□□□ -0.31
TRAPPC8-210ENST00000582513 FREM1Q5H8C1 2179 aa13.08□□□□□ -0.32
TRAPPC8-210ENST00000582513 LOC102725191A0A1B0GVB3 256 aa13.08□□□□□ -0.32
TRAPPC8-210ENST00000582513 CDIPTO14735 213 aa13.08□□□□□ -0.32
TRAPPC8-210ENST00000582513 IGHV3-9P01782 118 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms