RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 TAGLNQ01995 201 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 ARL6IP1Q15041 203 aa16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 TPRA1Q86W33 373 aa16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 YTHDF1Q9BYJ9 559 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 DAPK2Q9UIK4 370 aa16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 SSR3Q9UNL2 185 aa16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 LINC00473A8K010 186 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 J3QRK9 145 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 DTYMKP23919 212 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 DUTP33316 252 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 CBX3Q13185 183 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 RTL8BQ17RB0 113 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 HACD4Q5VWC8 232 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 DDB2Q92466 427 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 CENPOQ9BU64 300 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 OR51E2Q9H255 320 aa16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 RRP15Q9Y3B9 282 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-216ENST00000581108 NHLRC4P0CG21 123 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 MRGPRG-AS1Q2M3A8 158 aa16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 ACSM6Q6P461 480 aa16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 POC5Q8NA72 575 aa16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 NUDCD2Q8WVJ2 157 aa16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 ASCL2Q99929 193 aa16.39■□□□□ 0.21
CSNK1D-216ENST00000581108 NBEAL2Q6ZNJ1 2754 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 RRASP10301 218 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 SDC2P34741 201 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 ZNF773Q6PK81 442 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 ADTRPQ96IZ2 230 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 RNF167Q9H6Y7 350 aa16.38■□□□□ 0.21
CSNK1D-216ENST00000581108 TMEM235A6NFC5 223 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 CRYZL1O95825 349 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 CLEC2LP0C7M8 214 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 SPNP16150 400 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 NFYAP23511 347 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 MXD1Q05195 221 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 SFXN4Q6P4A7 337 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 LGALS14Q8TCE9 139 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 WWC2-AS2Q96NR7 200 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 DCSTAMPQ9H295 470 aa16.37■□□□□ 0.21
CSNK1D-216ENST00000581108 C13orf42A0A1B0GVH6 325 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 H3BUA1 57 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 SSX5O60225 188 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 APELAP0DMC3 54 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 PITPNAQ00169 270 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 IDO2Q6ZQW0 420 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 TEX45Q8NA69 505 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 TMEM68Q96MH6 324 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 OR2W1Q9Y3N9 320 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 SMAD5-AS1Q9Y6J3 95 aa16.36■□□□□ 0.21
CSNK1D-216ENST00000581108 ANKRD34BA5PLL1 514 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 MSGN1A6NI15 193 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 CTXN2P0C2S0 81 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 UBE2KP61086 200 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 DEFA5Q01523 94 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 PRSS8Q16651 343 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 VMA21Q3ZAQ7 101 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 ZNF645Q8N7E2 425 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 RANGRFQ9HD47 186 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 RHBDL2Q9NX52 303 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 U3KQK5 164 aa16.35■□□□□ 0.21
CSNK1D-216ENST00000581108 A0A0G2JLM5 398 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 LOC100506127A0A0U1RQW1 187 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 SCGNO76038 276 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 HLA-DQB1P01920 261 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 GNG2P59768 71 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 TNXAQ16473 311 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 CNIH2Q6PI25 160 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 OR5H6Q8NGV6 325 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 OSR1Q8TAX0 266 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 OR4C12Q96R67 309 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 PHB2Q99623 299 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 TINAGL1Q9GZM7 467 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 COA4Q9NYJ1 87 aa16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 KMT2CQ8NEZ4 4911 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-216ENST00000581108 IGKV1D-13A0A0B4J2D9 117 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 TUSC2O75896 110 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 IGLV2-14P01704 120 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 IGKV1-13P0DP09 117 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 GP9P14770 177 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 RPL30P62888 115 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 NEDD8Q15843 81 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 HAPLN4Q86UW8 402 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 OR6Q1Q8NGQ2 317 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 DCUN1D5Q9BTE7 237 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 ANXA10Q9UJ72 324 aa16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 RBMX2Q9Y388 322 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-216ENST00000581108 HUWE1Q7Z6Z7 4374 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 FCGR3BO75015 233 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 BRI3O95415 125 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 CD36P16671 472 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 OR2B11Q5JQS5 317 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 IDNKQ5T6J7 187 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 KCTD9Q7L273 389 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 STAB2Q8WWQ8 2551 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 SRSF12Q8WXF0 261 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 ACOT12Q8WYK0 555 aa16.32■□□□□ 0.2
CSNK1D-216ENST00000581108 TRAV18A0A075B6X5 111 aa16.31■□□□□ 0.2
CSNK1D-216ENST00000581108 RBMXL2O75526 392 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-216ENST00000581108 SAA1P0DJI8 122 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-216ENST00000581108 ZP3P21754 424 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms