RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MPPED1O15442 326 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 FGF16O43320 207 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 HOXA3O43365 443 aaPredicted RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 TCF21O43680 179 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 OR2F2O95006 317 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 SPDEFO95238 335 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 PTTG1O95997 202 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 MOSP00540 346 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 IGKV1D-33P01593 117 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 IGKV1-33P01594 117 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 IGHV4-59P01825 116 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 FGF2P09038 288 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 RPA2P15927 270 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 LGALS7P47929 136 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 RAG2P55895 527 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 TAS2R31P59538 309 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 RPL30P62888 115 aaKnown RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 DHODHQ02127 395 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 BAMBIQ13145 260 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM177Q53S58 311 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 C11orf88Q6PI97 169 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 OR4S2Q8NH73 311 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 OSR1Q8TAX0 266 aaPredicted RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 RBM14Q96PK6 669 aaKnown RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 AIFM2Q9BRQ8 373 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 PLEKHA2Q9HB19 425 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 SLC35D1Q9NTN3 355 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 C1RLQ9NZP8 487 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 COMMD9Q9P000 198 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 VSIG4Q9Y279 399 aa8.33□□□□□ -1.08
CCDC47-203ENST00000580986 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
CCDC47-203ENST00000580986 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.086e-8■□□□□ 9.1
CCDC47-203ENST00000580986 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 NDUFA3O95167 84 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 HPRT1P00492 218 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 TCRBP04435 133 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 RLN1P04808 185 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 SNRNP70P08621 437 aaKnown RBP8.32□□□□□ -1.08
CCDC47-203ENST00000580986 CCR6P51684 374 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 BRWD1-AS2P59051 145 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 SLC9A3R2Q15599 337 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 POU2AF1Q16633 256 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 PHLDA2Q53GA4 152 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 SLC25A42Q86VD7 318 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 SGPP2Q8IWX5 399 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 CENPSQ8N2Z9 138 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 DRAXINQ8NBI3 349 aaPredicted RBP8.32□□□□□ -1.08
CCDC47-203ENST00000580986 NPBQ8NG41 125 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 TCTEX1D2Q8WW35 142 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 CAPSLQ8WWF8 208 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 FLYWCH2Q96CP2 140 aaKnown RBP8.32□□□□□ -1.08
CCDC47-203ENST00000580986 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
CCDC47-203ENST00000580986 NUBP2Q9Y5Y2 271 aa8.32□□□□□ -1.08
CCDC47-203ENST00000580986 CUBNO60494 3623 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 C3orf85A0A1B0GTC6 90 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 H7C2Y5 167 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 TNFSF12O43508 249 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 IGKV1-16P04430 117 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM11P17152 192 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 UCP1P25874 307 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 PAX6P26367 422 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 GLDNQ6ZMI3 551 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-203ENST00000580986 SPAG16Q8N0X2 631 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 OR51H1Q8NH63 302 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 ENKURQ8TC29 256 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 RANBP3Q9H6Z4 567 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-203ENST00000580986 NAA60Q9H7X0 242 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 ESM1Q9NQ30 184 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 KCNIP3Q9Y2W7 256 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
CCDC47-203ENST00000580986 IGHV3-72A0A0B4J1Y9 119 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 FCGR3BO75015 233 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 CRYZL1O95825 349 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 HRASP01112 189 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 ANXA3P12429 323 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 PI3P19957 117 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 LINC00205P59089 165 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 UBE2KP61086 200 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 UBA52P62987 128 aaKnown RBP8.3□□□□□ -1.08
CCDC47-203ENST00000580986 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
CCDC47-203ENST00000580986 SRPXP78539 464 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 HES1Q14469 280 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 ZNF585BQ52M93 769 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 PLET1Q6UQ28 207 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 CCBE1Q6UXH8 406 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-203ENST00000580986 NRARPQ7Z6K4 114 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 VSTM2AQ8TAG5 236 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 IL22RA2Q969J5 263 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 HARBI1Q96MB7 349 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms