RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CBLN1P23435 193 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TAS2R43P59537 309 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 HLA-DRB3P79483 266 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TPBGQ13641 420 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RTL8BQ17RB0 113 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 VMA21Q3ZAQ7 101 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 FAM106AQ4KMX7 169 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TMEM177Q53S58 311 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TTC23Q5W5X9 447 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SLC25A42Q86VD7 318 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SRSF12Q8WXF0 261 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PGLYRP3Q96LB9 341 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 OR1A1Q9P1Q5 309 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ACTL6BO94805 426 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 APELAP0DMC3 54 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 LINC00205P59089 165 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 EWSR1Q01844 656 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TNXAQ16473 311 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TM4SF20Q53R12 229 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 OR4A47Q6IF82 309 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PHLDA1Q8WV24 401 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CYYR1Q96J86 154 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DERL3Q96Q80 235 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TM2D1Q9BX74 207 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DNAH17Q9UFH2 4485 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
CDK5RAP3-216ENST00000579853 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 KIR2DL5BA0A0G2JN68 375 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 KIR2DL5BA0A0G2JPC4 375 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 LOC100130705A0A1B0GUX0 176 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 A8MWP6 167 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CIB2O75838 187 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 LALBAP00709 142 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 HTR2CP28335 458 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SERPINB10P48595 397 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TCTAP57738 103 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 UBE2KP61086 200 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PRSS8Q16651 343 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 C15orf32Q32M92 178 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SLC38A6Q8IZM9 456 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 KIR2DL5AQ8N109 375 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TTC9CQ8N5M4 171 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 STPG3Q8N7X2 389 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 KIR2DL5BQ8NHK3 375 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MARC2Q969Z3 335 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 C12orf4Q9NQ89 552 aa9.1□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PPP5D1E7EU14 171 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 OR2C1O95371 312 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 BPNT1O95861 308 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CD1AP06126 327 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SCTP09683 121 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SRMP19623 302 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ZNF45Q02386 682 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RBPMS2Q6ZRY4 209 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 OR1L6Q8NGR2 347 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 APH1BQ8WW43 257 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RNF183Q96D59 192 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ADTRPQ96IZ2 230 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 URM1Q9BTM9 101 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 Q9N2K0 584 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RDH8Q9NYR8 311 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ZNF257Q9Y2Q1 563 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SRRM4A7MD48 611 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ATP5HO75947 161 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR2J3O76001 311 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SCAF4O95104 1147 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 HLA-AP01891 365 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PRH1P02810 166 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 IFNA4P05014 189 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ARL3P36405 182 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MRGPRG-AS1Q2M3A8 158 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C1orf100Q5SVJ3 147 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR10K2Q6IF99 312 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MMD2Q8IY49 270 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZFP41Q8N8Y5 198 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 UXS1Q8NBZ7 420 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OSR1Q8TAX0 266 aaPredicted RBP9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PYDC1Q8WXC3 89 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TMEM80Q96HE8 168 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 NICN1Q9BSH3 213 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C9orf16Q9BUW7 83 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR2D2Q9H210 308 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SDHAF2Q9NX18 166 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MLXQ9UH92 298 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 AK3Q9UIJ7 227 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 HSF4Q9ULV5 492 aa9.08□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZNF320A2RRD8 509 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms